mirror of
https://github.com/pybind/pybind11.git
synced 2024-11-28 08:02:00 +00:00
Fix undefined memoryview format (#2223)
* Fix undefined memoryview format * Add missing <algorithm> header * Add workaround for py27 array compatibility * Workaround py27 memoryview behavior * Fix memoryview constructor from buffer_info * Workaround PyMemoryView_FromMemory availability in py27 * Fix up memoryview tests * Update memoryview test from buffer to check signedness * Use static factory method to create memoryview * Remove ndim arg from memoryview::frombuffer and add tests * Allow ndim=0 memoryview and documentation fixup * Use void* to align to frombuffer method signature * Add const variants of frombuffer and frommemory * Add memory view section in doc * Fix docs * Add test for null buffer * Workaround py27 nullptr behavior in test * Rename frombuffer to from_buffer
This commit is contained in:
parent
aa982e131d
commit
e248869893
@ -18,3 +18,5 @@ ALIASES += "endrst=\endverbatim"
|
|||||||
QUIET = YES
|
QUIET = YES
|
||||||
WARNINGS = YES
|
WARNINGS = YES
|
||||||
WARN_IF_UNDOCUMENTED = NO
|
WARN_IF_UNDOCUMENTED = NO
|
||||||
|
PREDEFINED = DOXYGEN_SHOULD_SKIP_THIS \
|
||||||
|
PY_MAJOR_VERSION=3
|
||||||
|
@ -384,3 +384,45 @@ operation on the C++ side:
|
|||||||
|
|
||||||
py::array a = /* A NumPy array */;
|
py::array a = /* A NumPy array */;
|
||||||
py::array b = a[py::make_tuple(0, py::ellipsis(), 0)];
|
py::array b = a[py::make_tuple(0, py::ellipsis(), 0)];
|
||||||
|
|
||||||
|
Memory view
|
||||||
|
===========
|
||||||
|
|
||||||
|
For a case when we simply want to provide a direct accessor to C/C++ buffer
|
||||||
|
without a concrete class object, we can return a ``memoryview`` object. Suppose
|
||||||
|
we wish to expose a ``memoryview`` for 2x4 uint8_t array, we can do the
|
||||||
|
following:
|
||||||
|
|
||||||
|
.. code-block:: cpp
|
||||||
|
|
||||||
|
const uint8_t buffer[] = {
|
||||||
|
0, 1, 2, 3,
|
||||||
|
4, 5, 6, 7
|
||||||
|
};
|
||||||
|
m.def("get_memoryview2d", []() {
|
||||||
|
return py::memoryview::from_buffer(
|
||||||
|
buffer, // buffer pointer
|
||||||
|
{ 2, 4 }, // shape (rows, cols)
|
||||||
|
{ sizeof(uint8_t) * 4, sizeof(uint8_t) } // strides in bytes
|
||||||
|
);
|
||||||
|
})
|
||||||
|
|
||||||
|
This approach is meant for providing a ``memoryview`` for a C/C++ buffer not
|
||||||
|
managed by Python. The user is responsible for managing the lifetime of the
|
||||||
|
buffer. Using a ``memoryview`` created in this way after deleting the buffer in
|
||||||
|
C++ side results in undefined behavior.
|
||||||
|
|
||||||
|
We can also use ``memoryview::from_memory`` for a simple 1D contiguous buffer:
|
||||||
|
|
||||||
|
.. code-block:: cpp
|
||||||
|
|
||||||
|
m.def("get_memoryview1d", []() {
|
||||||
|
return py::memoryview::from_memory(
|
||||||
|
buffer, // buffer pointer
|
||||||
|
sizeof(uint8_t) * 8 // buffer size
|
||||||
|
);
|
||||||
|
})
|
||||||
|
|
||||||
|
.. note::
|
||||||
|
|
||||||
|
``memoryview::from_memory`` is not available in Python 2.
|
||||||
|
@ -54,7 +54,7 @@ struct buffer_info {
|
|||||||
explicit buffer_info(Py_buffer *view, bool ownview = true)
|
explicit buffer_info(Py_buffer *view, bool ownview = true)
|
||||||
: buffer_info(view->buf, view->itemsize, view->format, view->ndim,
|
: buffer_info(view->buf, view->itemsize, view->format, view->ndim,
|
||||||
{view->shape, view->shape + view->ndim}, {view->strides, view->strides + view->ndim}, view->readonly) {
|
{view->shape, view->shape + view->ndim}, {view->strides, view->strides + view->ndim}, view->readonly) {
|
||||||
this->view = view;
|
this->m_view = view;
|
||||||
this->ownview = ownview;
|
this->ownview = ownview;
|
||||||
}
|
}
|
||||||
|
|
||||||
@ -73,16 +73,18 @@ struct buffer_info {
|
|||||||
ndim = rhs.ndim;
|
ndim = rhs.ndim;
|
||||||
shape = std::move(rhs.shape);
|
shape = std::move(rhs.shape);
|
||||||
strides = std::move(rhs.strides);
|
strides = std::move(rhs.strides);
|
||||||
std::swap(view, rhs.view);
|
std::swap(m_view, rhs.m_view);
|
||||||
std::swap(ownview, rhs.ownview);
|
std::swap(ownview, rhs.ownview);
|
||||||
readonly = rhs.readonly;
|
readonly = rhs.readonly;
|
||||||
return *this;
|
return *this;
|
||||||
}
|
}
|
||||||
|
|
||||||
~buffer_info() {
|
~buffer_info() {
|
||||||
if (view && ownview) { PyBuffer_Release(view); delete view; }
|
if (m_view && ownview) { PyBuffer_Release(m_view); delete m_view; }
|
||||||
}
|
}
|
||||||
|
|
||||||
|
Py_buffer *view() const { return m_view; }
|
||||||
|
Py_buffer *&view() { return m_view; }
|
||||||
private:
|
private:
|
||||||
struct private_ctr_tag { };
|
struct private_ctr_tag { };
|
||||||
|
|
||||||
@ -90,7 +92,7 @@ private:
|
|||||||
detail::any_container<ssize_t> &&shape_in, detail::any_container<ssize_t> &&strides_in, bool readonly)
|
detail::any_container<ssize_t> &&shape_in, detail::any_container<ssize_t> &&strides_in, bool readonly)
|
||||||
: buffer_info(ptr, itemsize, format, ndim, std::move(shape_in), std::move(strides_in), readonly) { }
|
: buffer_info(ptr, itemsize, format, ndim, std::move(shape_in), std::move(strides_in), readonly) { }
|
||||||
|
|
||||||
Py_buffer *view = nullptr;
|
Py_buffer *m_view = nullptr;
|
||||||
bool ownview = false;
|
bool ownview = false;
|
||||||
};
|
};
|
||||||
|
|
||||||
|
@ -1336,35 +1336,139 @@ public:
|
|||||||
|
|
||||||
class memoryview : public object {
|
class memoryview : public object {
|
||||||
public:
|
public:
|
||||||
explicit memoryview(const buffer_info& info) {
|
PYBIND11_OBJECT_CVT(memoryview, object, PyMemoryView_Check, PyMemoryView_FromObject)
|
||||||
static Py_buffer buf { };
|
|
||||||
// Py_buffer uses signed sizes, strides and shape!..
|
|
||||||
static std::vector<Py_ssize_t> py_strides { };
|
|
||||||
static std::vector<Py_ssize_t> py_shape { };
|
|
||||||
buf.buf = info.ptr;
|
|
||||||
buf.itemsize = info.itemsize;
|
|
||||||
buf.format = const_cast<char *>(info.format.c_str());
|
|
||||||
buf.ndim = (int) info.ndim;
|
|
||||||
buf.len = info.size;
|
|
||||||
py_strides.clear();
|
|
||||||
py_shape.clear();
|
|
||||||
for (size_t i = 0; i < (size_t) info.ndim; ++i) {
|
|
||||||
py_strides.push_back(info.strides[i]);
|
|
||||||
py_shape.push_back(info.shape[i]);
|
|
||||||
}
|
|
||||||
buf.strides = py_strides.data();
|
|
||||||
buf.shape = py_shape.data();
|
|
||||||
buf.suboffsets = nullptr;
|
|
||||||
buf.readonly = info.readonly;
|
|
||||||
buf.internal = nullptr;
|
|
||||||
|
|
||||||
m_ptr = PyMemoryView_FromBuffer(&buf);
|
/** \rst
|
||||||
|
Creates ``memoryview`` from ``buffer_info``.
|
||||||
|
|
||||||
|
``buffer_info`` must be created from ``buffer::request()``. Otherwise
|
||||||
|
throws an exception.
|
||||||
|
|
||||||
|
For creating a ``memoryview`` from objects that support buffer protocol,
|
||||||
|
use ``memoryview(const object& obj)`` instead of this constructor.
|
||||||
|
\endrst */
|
||||||
|
explicit memoryview(const buffer_info& info) {
|
||||||
|
if (!info.view())
|
||||||
|
pybind11_fail("Prohibited to create memoryview without Py_buffer");
|
||||||
|
// Note: PyMemoryView_FromBuffer never increments obj reference.
|
||||||
|
m_ptr = (info.view()->obj) ?
|
||||||
|
PyMemoryView_FromObject(info.view()->obj) :
|
||||||
|
PyMemoryView_FromBuffer(info.view());
|
||||||
if (!m_ptr)
|
if (!m_ptr)
|
||||||
pybind11_fail("Unable to create memoryview from buffer descriptor");
|
pybind11_fail("Unable to create memoryview from buffer descriptor");
|
||||||
}
|
}
|
||||||
|
|
||||||
PYBIND11_OBJECT_CVT(memoryview, object, PyMemoryView_Check, PyMemoryView_FromObject)
|
/** \rst
|
||||||
|
Creates ``memoryview`` from static buffer.
|
||||||
|
|
||||||
|
This method is meant for providing a ``memoryview`` for C/C++ buffer not
|
||||||
|
managed by Python. The caller is responsible for managing the lifetime
|
||||||
|
of ``ptr`` and ``format``, which MUST outlive the memoryview constructed
|
||||||
|
here.
|
||||||
|
|
||||||
|
See also: Python C API documentation for `PyMemoryView_FromBuffer`_.
|
||||||
|
|
||||||
|
.. _PyMemoryView_FromBuffer: https://docs.python.org/c-api/memoryview.html#c.PyMemoryView_FromBuffer
|
||||||
|
|
||||||
|
:param ptr: Pointer to the buffer.
|
||||||
|
:param itemsize: Byte size of an element.
|
||||||
|
:param format: Pointer to the null-terminated format string. For
|
||||||
|
homogeneous Buffers, this should be set to
|
||||||
|
``format_descriptor<T>::value``.
|
||||||
|
:param shape: Shape of the tensor (1 entry per dimension).
|
||||||
|
:param strides: Number of bytes between adjacent entries (for each
|
||||||
|
per dimension).
|
||||||
|
:param readonly: Flag to indicate if the underlying storage may be
|
||||||
|
written to.
|
||||||
|
\endrst */
|
||||||
|
static memoryview from_buffer(
|
||||||
|
void *ptr, ssize_t itemsize, const char *format,
|
||||||
|
detail::any_container<ssize_t> shape,
|
||||||
|
detail::any_container<ssize_t> strides, bool readonly = false);
|
||||||
|
|
||||||
|
static memoryview from_buffer(
|
||||||
|
const void *ptr, ssize_t itemsize, const char *format,
|
||||||
|
detail::any_container<ssize_t> shape,
|
||||||
|
detail::any_container<ssize_t> strides) {
|
||||||
|
return memoryview::from_buffer(
|
||||||
|
const_cast<void*>(ptr), itemsize, format, shape, strides, true);
|
||||||
|
}
|
||||||
|
|
||||||
|
template<typename T>
|
||||||
|
static memoryview from_buffer(
|
||||||
|
T *ptr, detail::any_container<ssize_t> shape,
|
||||||
|
detail::any_container<ssize_t> strides, bool readonly = false) {
|
||||||
|
return memoryview::from_buffer(
|
||||||
|
reinterpret_cast<void*>(ptr), sizeof(T),
|
||||||
|
format_descriptor<T>::value, shape, strides, readonly);
|
||||||
|
}
|
||||||
|
|
||||||
|
template<typename T>
|
||||||
|
static memoryview from_buffer(
|
||||||
|
const T *ptr, detail::any_container<ssize_t> shape,
|
||||||
|
detail::any_container<ssize_t> strides) {
|
||||||
|
return memoryview::from_buffer(
|
||||||
|
const_cast<T*>(ptr), shape, strides, true);
|
||||||
|
}
|
||||||
|
|
||||||
|
#if PY_MAJOR_VERSION >= 3
|
||||||
|
/** \rst
|
||||||
|
Creates ``memoryview`` from static memory.
|
||||||
|
|
||||||
|
This method is meant for providing a ``memoryview`` for C/C++ buffer not
|
||||||
|
managed by Python. The caller is responsible for managing the lifetime
|
||||||
|
of ``mem``, which MUST outlive the memoryview constructed here.
|
||||||
|
|
||||||
|
This method is not available in Python 2.
|
||||||
|
|
||||||
|
See also: Python C API documentation for `PyMemoryView_FromBuffer`_.
|
||||||
|
|
||||||
|
.. _PyMemoryView_FromMemory: https://docs.python.org/c-api/memoryview.html#c.PyMemoryView_FromMemory
|
||||||
|
\endrst */
|
||||||
|
static memoryview from_memory(void *mem, ssize_t size, bool readonly = false) {
|
||||||
|
PyObject* ptr = PyMemoryView_FromMemory(
|
||||||
|
reinterpret_cast<char*>(mem), size,
|
||||||
|
(readonly) ? PyBUF_READ : PyBUF_WRITE);
|
||||||
|
if (!ptr)
|
||||||
|
pybind11_fail("Could not allocate memoryview object!");
|
||||||
|
return memoryview(object(ptr, stolen_t{}));
|
||||||
|
}
|
||||||
|
|
||||||
|
static memoryview from_memory(const void *mem, ssize_t size) {
|
||||||
|
return memoryview::from_memory(const_cast<void*>(mem), size, true);
|
||||||
|
}
|
||||||
|
#endif
|
||||||
};
|
};
|
||||||
|
|
||||||
|
#ifndef DOXYGEN_SHOULD_SKIP_THIS
|
||||||
|
inline memoryview memoryview::from_buffer(
|
||||||
|
void *ptr, ssize_t itemsize, const char* format,
|
||||||
|
detail::any_container<ssize_t> shape,
|
||||||
|
detail::any_container<ssize_t> strides, bool readonly) {
|
||||||
|
size_t ndim = shape->size();
|
||||||
|
if (ndim != strides->size())
|
||||||
|
pybind11_fail("memoryview: shape length doesn't match strides length");
|
||||||
|
ssize_t size = ndim ? 1 : 0;
|
||||||
|
for (size_t i = 0; i < ndim; ++i)
|
||||||
|
size *= (*shape)[i];
|
||||||
|
Py_buffer view;
|
||||||
|
view.buf = ptr;
|
||||||
|
view.obj = nullptr;
|
||||||
|
view.len = size * itemsize;
|
||||||
|
view.readonly = static_cast<int>(readonly);
|
||||||
|
view.itemsize = itemsize;
|
||||||
|
view.format = const_cast<char*>(format);
|
||||||
|
view.ndim = static_cast<int>(ndim);
|
||||||
|
view.shape = shape->data();
|
||||||
|
view.strides = strides->data();
|
||||||
|
view.suboffsets = nullptr;
|
||||||
|
view.internal = nullptr;
|
||||||
|
PyObject* obj = PyMemoryView_FromBuffer(&view);
|
||||||
|
if (!obj)
|
||||||
|
throw error_already_set();
|
||||||
|
return memoryview(object(obj, stolen_t{}));
|
||||||
|
}
|
||||||
|
#endif // DOXYGEN_SHOULD_SKIP_THIS
|
||||||
/// @} pytypes
|
/// @} pytypes
|
||||||
|
|
||||||
/// \addtogroup python_builtins
|
/// \addtogroup python_builtins
|
||||||
|
@ -318,4 +318,53 @@ TEST_SUBMODULE(pytypes, m) {
|
|||||||
m.def("test_list_slicing", [](py::list a) {
|
m.def("test_list_slicing", [](py::list a) {
|
||||||
return a[py::slice(0, -1, 2)];
|
return a[py::slice(0, -1, 2)];
|
||||||
});
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_object", [](py::buffer b) {
|
||||||
|
return py::memoryview(b);
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_buffer_info", [](py::buffer b) {
|
||||||
|
return py::memoryview(b.request());
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_from_buffer", [](bool is_unsigned) {
|
||||||
|
static const int16_t si16[] = { 3, 1, 4, 1, 5 };
|
||||||
|
static const uint16_t ui16[] = { 2, 7, 1, 8 };
|
||||||
|
if (is_unsigned)
|
||||||
|
return py::memoryview::from_buffer(
|
||||||
|
ui16, { 4 }, { sizeof(uint16_t) });
|
||||||
|
else
|
||||||
|
return py::memoryview::from_buffer(
|
||||||
|
si16, { 5 }, { sizeof(int16_t) });
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_from_buffer_nativeformat", []() {
|
||||||
|
static const char* format = "@i";
|
||||||
|
static const int32_t arr[] = { 4, 7, 5 };
|
||||||
|
return py::memoryview::from_buffer(
|
||||||
|
arr, sizeof(int32_t), format, { 3 }, { sizeof(int32_t) });
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_from_buffer_empty_shape", []() {
|
||||||
|
static const char* buf = "";
|
||||||
|
return py::memoryview::from_buffer(buf, 1, "B", { }, { });
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_from_buffer_invalid_strides", []() {
|
||||||
|
static const char* buf = "\x02\x03\x04";
|
||||||
|
return py::memoryview::from_buffer(buf, 1, "B", { 3 }, { });
|
||||||
|
});
|
||||||
|
|
||||||
|
m.def("test_memoryview_from_buffer_nullptr", []() {
|
||||||
|
return py::memoryview::from_buffer(
|
||||||
|
static_cast<void*>(nullptr), 1, "B", { }, { });
|
||||||
|
});
|
||||||
|
|
||||||
|
#if PY_MAJOR_VERSION >= 3
|
||||||
|
m.def("test_memoryview_from_memory", []() {
|
||||||
|
const char* buf = "\xff\xe1\xab\x37";
|
||||||
|
return py::memoryview::from_memory(
|
||||||
|
buf, static_cast<ssize_t>(strlen(buf)));
|
||||||
|
});
|
||||||
|
#endif
|
||||||
}
|
}
|
||||||
|
@ -278,3 +278,70 @@ def test_number_protocol():
|
|||||||
def test_list_slicing():
|
def test_list_slicing():
|
||||||
li = list(range(100))
|
li = list(range(100))
|
||||||
assert li[::2] == m.test_list_slicing(li)
|
assert li[::2] == m.test_list_slicing(li)
|
||||||
|
|
||||||
|
|
||||||
|
@pytest.mark.parametrize('method, args, fmt, expected_view', [
|
||||||
|
(m.test_memoryview_object, (b'red',), 'B', b'red'),
|
||||||
|
(m.test_memoryview_buffer_info, (b'green',), 'B', b'green'),
|
||||||
|
(m.test_memoryview_from_buffer, (False,), 'h', [3, 1, 4, 1, 5]),
|
||||||
|
(m.test_memoryview_from_buffer, (True,), 'H', [2, 7, 1, 8]),
|
||||||
|
(m.test_memoryview_from_buffer_nativeformat, (), '@i', [4, 7, 5]),
|
||||||
|
])
|
||||||
|
def test_memoryview(method, args, fmt, expected_view):
|
||||||
|
view = method(*args)
|
||||||
|
assert isinstance(view, memoryview)
|
||||||
|
assert view.format == fmt
|
||||||
|
if isinstance(expected_view, bytes) or sys.version_info[0] >= 3:
|
||||||
|
view_as_list = list(view)
|
||||||
|
else:
|
||||||
|
# Using max to pick non-zero byte (big-endian vs little-endian).
|
||||||
|
view_as_list = [max([ord(c) for c in s]) for s in view]
|
||||||
|
assert view_as_list == list(expected_view)
|
||||||
|
|
||||||
|
|
||||||
|
@pytest.mark.skipif(
|
||||||
|
not hasattr(sys, 'getrefcount'),
|
||||||
|
reason='getrefcount is not available')
|
||||||
|
@pytest.mark.parametrize('method', [
|
||||||
|
m.test_memoryview_object,
|
||||||
|
m.test_memoryview_buffer_info,
|
||||||
|
])
|
||||||
|
def test_memoryview_refcount(method):
|
||||||
|
buf = b'\x0a\x0b\x0c\x0d'
|
||||||
|
ref_before = sys.getrefcount(buf)
|
||||||
|
view = method(buf)
|
||||||
|
ref_after = sys.getrefcount(buf)
|
||||||
|
assert ref_before < ref_after
|
||||||
|
assert list(view) == list(buf)
|
||||||
|
|
||||||
|
|
||||||
|
def test_memoryview_from_buffer_empty_shape():
|
||||||
|
view = m.test_memoryview_from_buffer_empty_shape()
|
||||||
|
assert isinstance(view, memoryview)
|
||||||
|
assert view.format == 'B'
|
||||||
|
if sys.version_info.major < 3:
|
||||||
|
# Python 2 behavior is weird, but Python 3 (the future) is fine.
|
||||||
|
assert bytes(view).startswith(b'<memory at ')
|
||||||
|
else:
|
||||||
|
assert bytes(view) == b''
|
||||||
|
|
||||||
|
|
||||||
|
def test_test_memoryview_from_buffer_invalid_strides():
|
||||||
|
with pytest.raises(RuntimeError):
|
||||||
|
m.test_memoryview_from_buffer_invalid_strides()
|
||||||
|
|
||||||
|
|
||||||
|
def test_test_memoryview_from_buffer_nullptr():
|
||||||
|
if sys.version_info.major < 3:
|
||||||
|
m.test_memoryview_from_buffer_nullptr()
|
||||||
|
else:
|
||||||
|
with pytest.raises(ValueError):
|
||||||
|
m.test_memoryview_from_buffer_nullptr()
|
||||||
|
|
||||||
|
|
||||||
|
@pytest.mark.skipif(sys.version_info.major < 3, reason='API not available')
|
||||||
|
def test_memoryview_from_memory():
|
||||||
|
view = m.test_memoryview_from_memory()
|
||||||
|
assert isinstance(view, memoryview)
|
||||||
|
assert view.format == 'B'
|
||||||
|
assert bytes(view) == b'\xff\xe1\xab\x37'
|
||||||
|
Loading…
Reference in New Issue
Block a user