Commit Graph

93 Commits

Author SHA1 Message Date
Ralf W. Grosse-Kunstleve
7c580586f8
Correct options on Eigen::MappedSparseMatrix & adding MSVC C4127 suppression around Eigen includes. (#3352)
* Adding MSVC C4127 suppression around Eigen includes.

* For MSVC 2015 only: also adding the C4127 suppression to test_eigen.cpp

* Copying original change from PR #3343, with extra line breaks to not run past 99 columns (our desired but currently not enforced limit).
2021-10-11 13:13:01 -07:00
Henry Schreiner
d7a7edc12b tests: support Eigen configuration 2021-10-04 10:06:12 -07:00
Jeremy Maitin-Shepard
62c4909cce
Add custom_type_setup attribute (#3287)
* Fix `pybind11::object::operator=` to be safe if `*this` is accessible from Python

* Add `custom_type_setup` attribute

This allows for custom modifications to the PyHeapTypeObject prior to
calling `PyType_Ready`.  This may be used, for example, to define
`tp_traverse` and `tp_clear` functions.
2021-09-24 12:08:22 -07:00
Laramie Leavitt
0e599589fe
Fix thread safety for pybind11 loader_life_support (#3237)
* Fix thread safety for pybind11 loader_life_support

Fixes issue: https://github.com/pybind/pybind11/issues/2765

This converts the vector of PyObjects to either a single void* or
a per-thread void* depending on the WITH_THREAD define.

The new field is used by each thread to construct a stack
of loader_life_support frames that can extend the life of python
objects.

The pointer is updated when the loader_life_support object is allocated
(which happens before a call) as well as on release.

Each loader_life_support maintains a set of PyObject references
that need to be lifetime extended; this is done by storing them
in a c++ std::unordered_set and clearing the references when the
method completes.

* Also update the internals version as the internal struct is no longer compatible

* Add test demonstrating threading works correctly.

It may be appropriate to run this under msan/tsan/etc.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update test to use lifetime-extended references rather than
std::string_view, as that's a C++ 17 feature.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Make loader_life_support members private

* Update version to dev2

* Update test to use python threading rather than concurrent.futures

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Remove unnecessary env in test

* Remove unnecessary pytest in test

* Use native C++ thread_local in place of python per-thread data structures to retain compatability

* clang-format test_thread.cpp

* Add a note about debugging the py::cast() error

* thread_test.py now propagates exceptions on join() calls.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* remove unused sys / merge

* Update include order in test_thread.cpp

* Remove spurious whitespace

* Update comment / whitespace.

* Address review comments

* lint cleanup

* Fix test IntStruct constructor.

* Add explicit to constructor

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-09-10 12:29:21 -04:00
Henry Schreiner
c14b193308
chore: increase CMake upper limit (#3124) 2021-07-28 18:04:14 -07:00
Henry Schreiner
cd061aeef1
style: pre-commit cleanup (#3111)
* style: disallow PyTest (should be pytest)

* style: cleanup spell checking a bit

* style: add a few items to the .gitignore
2021-07-14 16:49:13 -04:00
Antony Lee
5bcaaa0423
Add a std::filesystem::path <-> os.PathLike caster. (#2730) 2021-07-02 07:00:50 -07:00
Philipp Bucher
62976cfcb8
fix: using -Werror-all for Intel (#2948)
* correcting Werror for Intel

* adding ward for Intel

* adding wards for intel

* another ward for Intel

* missed one intel ward

* exact match for intel compiler

* removing inline limits

* disable warnings about inline limits

* formatter suggestion

* more indent

* hopefully make formatter happy

* addressed review

* fix &&

* Update tests/CMakeLists.txt

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
2021-04-14 14:01:27 -04:00
OnlineCop
cbae6d55c2
docs: fix CMake status for DOWNLOAD_EIGEN (#2857)
Co-authored-by: OnlineCop <onlinecop@gmail.com>
2021-02-12 17:11:23 -05:00
Henry Schreiner
eb83feefff
style: avoid using unintialized variables (#2806)
* style: avoid using unintialized variables

Tested with cmake --warn-unintialized -S . -B build

* refactor: use function for possibly uninit vars
2021-01-19 18:48:22 -05:00
Yannick Jadoul
0f8d5f2eb6
Add a Valgrind build on debug Python 3.9 (#2746)
* Adding a valgrind build on debug Python 3.9

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Add Valgrind suppression files

- Introduce suppression file, populate it with a first suppression taken from CPython, and fix one leak in the tests
- Suppress leak in NumPy
- More clean tests!
- Tests with names a-e passing (except for test_buffer)
- Suppress multiprocessing errors
- Merge multiprocessing suppressions into other suppression files
- Numpy seems to be spelled with a big P
- Append single entry from valgrind-misc.supp to valgrind-python.supp, and make clear valgrind-python.supp is only CPython

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Enable test_virtual_functions with a workaround

* Add a memcheck cmake target

- Add a memcheck cmake target
- Reformat cmake
- Appease the formatting overlords - they are angry
- Format CMake valgrind target decently

* Update CI config to new action versions

* fix: separate memcheck from pytest

* ci: cleanup

* Merge Valgrind and other deadsnakes builds

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-15 21:07:31 +01:00
Ralf W. Grosse-Kunstleve
8290a5a0da
clang -Wnon-virtual-dtor compatibility (#2626)
* Adding missing virtual destructors, to silence clang -Wnon-virtual-dtor warnings.

Tested with clang version 9.0.1-12 under an Ubuntu-like OS.
Originally discovered in the Google-internal environment.

* adding -Wnon-virtual-dtor for GNU|Intel|Clang
2020-10-29 06:12:14 -07:00
Eric Cousineau
c513b5e3c6
tests(CMakeLists): robustify against add'l versions of Boost (#2608)
* tests/CMakeLists: Robustify against add'l versions of Boost

* refactor: simpler impl

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2020-10-18 20:42:48 -04:00
Henry Schreiner
63f2deea32 chore: update Eigen 2020-10-15 17:38:49 -04:00
Henry Schreiner
3488494a81
refactor: import check as a common function (#2526)
* feat: import check as a common function

* docs: add cmake to docs
2020-10-02 22:34:22 -04:00
Eric Cousineau
d74be32109
tests: Fix test override execution (#2512) 2020-09-22 12:01:15 -04:00
andriish
38370a87f4
fix: support NVIDIA-PGI HPC SDK (#2475)
* Added guards to the includes

Added new CI config

Added new trigger

Changed CI workflow name

Debug CI

Debug CI

Debug CI

Debug CI

Added flags fro PGI

Disable Eigen

Removed tests that fail

Uncomment lines

* fix: missing include

fix: minor style cleanup

tests: support skipping

ci: remove and tighten a bit

fix: try msvc workaround for pgic

* tests: split up prealoc tests

* fix: PGI compiler fix

* fix: PGI void_t only

* fix: try to appease nvcc

* ci: better ordering for slow tests

* ci: minor improvements to testing

* ci: Add NumPy to testing

* ci: Eigen generates CUDA warnings / PGI errors

* Added CentOS7 back for a moment

* Fix YAML

* ci: runs-on missing

* centos7 is missing pytest

* ci: use C++11 on CentOS 7

* ci: test something else

* Try just adding flags on CentOS 7

* fix: CentOS 7

* refactor: move include to shared location

* Added verbose flag

* Try to use system cmake3 on CI

* Try to use system cmake3 on CI, attempt2

* Try to use system cmake3 on CI, attempt3

* tests: not finding pytest should be a warning, not a fatal error

* tests: cleanup

* Weird issue?

* fix: final polish

Co-authored-by: Andrii Verbytskyi <andrii.verbytskyi@mpp.mpg.de>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
Co-authored-by: Andrii Verbytskyi <averbyts@cern.ch>
2020-09-11 22:06:52 -04:00
Ciro Santilli
b47efd35fb
Use defined for some preprocessor variables that might be undefined (#2476)
The variables PYBIND11_HAS_OPTIONAL, PYBIND11_HAS_EXP_OPTIONAL, PYBIND11_HAS_VARIANT,
__clang__, __APPLE__ were not checked for defined in a minortity of instances.

If the project using pybind11 sets -Wundef, the warnings will show.

The test build is also modified to catch the problem.
2020-09-10 13:58:26 -04:00
Henry Schreiner
621906b3e7
fix: support nvcc and test (#2461)
* fix: support nvcc and test

* fixup! fix: support nvcc and test

* docs: mention what compilers fail

* fix: much simpler logic

* refactor: slightly faster / clearer
2020-09-10 11:49:26 -04:00
Henry Schreiner
04fdc44f50
tests: avoid putting build products into source directory (#2353)
* tests: keep source dir clean

* ci: make first build inplace

* ci: drop dev setting (wasn't doing anything)

* tests: warn if source directory is dirty
2020-08-19 13:11:57 -04:00
Henry Schreiner
1729aae96f
feat: new FindPython support (#2370)
* feat: FindPython support

* refactor: rename to PYBIND11_FINDPYTHON

* docs: Caps fixes

* feat: NOPYTHON mode

* test: check simple call

* docs: add changelog/upgrade guide

* feat: Support Python3 and Python2

* refactor: Use targets in tests

* fix: support CMake 3.4+

* feat: classic search also finds virtual environments

* docs: some updates from @wjakob's review

* fix: wrong name for QUIET mode variable, reported by @skoslowski

* refactor: cleaner output messaging

* fix: support debug Python's in FindPython mode too

* fixup! refactor: cleaner output messaging

* fix: missing pybind11_FOUND and pybind11_INCLUDE_DIR restored to subdir mode

* fix: nicer reporting of Python / PyPy

* fix: out-of-order variable fix

* docs: minor last-minute cleanup
2020-08-19 12:26:26 -04:00
Henry Schreiner
6404099712
docs: contrib/issue templates (#2377)
* docs: move helpers to .github where allowed

* docs: more guidelines in CONTRIBUTING

* chore: update issue templates

* fix: review from @bstaletic

* refactor: a few points from @rwgk

* docs: more touchup, review changes
2020-08-17 10:14:23 -04:00
Henry Schreiner
4d9024ec71
tests: cleanup and ci hardening (#2397)
* tests: refactor and cleanup

* refactor: more consistent

* tests: vendor six

* tests: more xfails, nicer system

* tests: simplify to info

* tests: suggestions from @YannickJadoul and @bstaletic

* tests: restore some pypy tests that now pass

* tests: rename info to env

* tests: strict False/True

* tests: drop explicit strict=True again

* tests: reduce minimum PyTest to 3.1
2020-08-16 16:02:12 -04:00
Henry Schreiner
f7abac6689
fix: boost's include dir was listed first (#2384) 2020-08-12 09:33:08 -04:00
Henry Schreiner
df115977df chore: cleanup 2020-08-06 11:54:41 -04:00
Henry Schreiner
94db5c5ed1 format: apply cmake-format 2020-07-30 20:27:55 -04:00
Henry Schreiner
e2a96890e1 format: add cmake-format to pre-commit 2020-07-30 20:27:55 -04:00
Henry Schreiner
6ec1775fff feat: drop CMake 3.6 and below, modernize CMake
fix: include PYTHON_IS_DEBUG
2020-07-30 20:27:55 -04:00
Henry Schreiner
1b880dfd5a ci: download EIGEN 2020-07-27 22:12:19 -04:00
Henry Schreiner
1f53c373e4 fix: C++17 mode on Clang may error 2020-07-26 09:25:27 -04:00
Henry Schreiner
a59c6de821 test: allow MSVC/Xcode to run the embed test 2020-07-23 17:42:53 -04:00
Henry Schreiner
49007b7ff3 test: fix warning/error on Python 2 in 14/17 mode 2020-07-23 17:42:53 -04:00
B Krishna Chaitanya
714424387f Refactor: Extract Custom Type Casts related tests 2020-07-01 00:07:49 +02:00
Eric Cousineau
2c30e0a118
cmake: Expose PYBIND11_TEST_OVERRIDE (#2218)
Primarily for the ccmake curses GUI
2020-05-31 07:00:55 +02:00
Jeremy Maitin-Shepard
a3f4a0e8ab Add support for __await__, __aiter__, and __anext__ protocols (#1842) 2019-07-18 09:02:35 +02:00
Saran Tunyasuvunakool
b60fd233fa Make sure detail::get_internals acquires the GIL before making Python calls. (#1836)
This is only necessary if `get_internals` is called for the first time in a given module when the running thread is in a GIL-released state.

Fixes #1364
2019-07-15 16:47:02 +02:00
Wenzel Jakob
e11e71d85c Make compiler flags for -Werror specific to GNU, Clang, or Intel 2019-06-11 23:28:58 +02:00
Roland Dreier
1aa8dd1745 Fix assertion failure for unions (#1685) (#1709)
In def_readonly and def_readwrite, there is an assertion that the member comes
from the class or a base class:

    static_assert(std::is_base_of<C, type>::value, "...");

However, if C and type are the same type, is_base_of will still only be true
if they are the same _non-union_ type.  This means we can't define accessors
for the members of a union type because of this assertion.

Update the assertion to test

    std::is_same<C, type>::value || std::is_base_of<C, type>::value

which will allow union types, or members of base classes.

Also add a basic unit test for accessing unions.
2019-06-11 23:28:58 +02:00
Borja Zarco
e2b884c33b Use PyGILState_GetThisThreadState when using gil_scoped_acquire. (#1211)
This avoids GIL deadlocking when pybind11 tries to acquire the GIL in a thread that already acquired it using standard Python API (e.g. when running from a Python thread).
2018-12-01 22:47:40 +09:00
oremanj
fd9bc8f54d Add basic support for tag-based static polymorphism (#1326)
* Add basic support for tag-based static polymorphism

Sometimes it is possible to look at a C++ object and know what its dynamic type is,
even if it doesn't use C++ polymorphism, because instances of the object and its
subclasses conform to some other mechanism for being self-describing; for example,
perhaps there's an enumerated "tag" or "kind" member in the base class that's always
set to an indication of the correct type. This might be done for performance reasons,
or to permit most-derived types to be trivially copyable. One of the most widely-known
examples is in LLVM: https://llvm.org/docs/HowToSetUpLLVMStyleRTTI.html

This PR permits pybind11 to be informed of such conventions via a new specializable
detail::polymorphic_type_hook<> template, which generalizes the previous logic for
determining the runtime type of an object based on C++ RTTI. Implementors provide
a way to map from a base class object to a const std::type_info* for the dynamic
type; pybind11 then uses this to ensure that casting a Base* to Python creates a
Python object that knows it's wrapping the appropriate sort of Derived.

There are a number of restrictions with this tag-based static polymorphism support
compared to pybind11's existing support for built-in C++ polymorphism:

- there is no support for this-pointer adjustment, so only single inheritance is permitted
- there is no way to make C++ code call new Python-provided subclasses
- when binding C++ classes that redefine a method in a subclass, the .def() must be
  repeated in the binding for Python to know about the update

But these are not much of an issue in practice in many cases, the impact on the
complexity of pybind11's innards is minimal and localized, and the support for
automatic downcasting improves usability a great deal.
2018-04-14 02:13:10 +02:00
Francesco Biscani
ba33b2fc79 Add -Wdeprecated to test suite and fix associated warnings (#1191)
This commit turns on `-Wdeprecated` in the test suite and fixes several
associated deprecation warnings that show up as a result:

- in C++17 `static constexpr` members are implicitly inline; our
  redeclaration (needed for C++11/14) is deprecated in C++17.

- various test suite classes have destructors and rely on implicit copy
  constructors, but implicit copy constructor definitions when a
  user-declared destructor is present was deprecated in C++11.

- Eigen also has various implicit copy constructors, so just disable
  `-Wdeprecated` in `eigen.h`.
2017-11-22 17:37:41 -04:00
Jason Rhinelander
64a99b92fe Specify minimum needed cmake version in test suite
Fixes #1117
2017-09-28 08:04:34 -03:00
Dean Moldovan
2b4477eb65 Make TypeErrors more informative when an optional header is missing
E.g. trying to convert a `list` to a `std::vector<int>` without
including <pybind11/stl.h> will now raise an error with a note that
suggests checking the headers.

The note is only appended if `std::` is found in the function
signature. This should only be the case when a header is missing.
E.g. when stl.h is included, the signature would contain `List[int]`
instead of `std::vector<int>` while using stl_bind.h would produce
something like `MyVector`. Similarly for `std::map`/`Dict`, `complex`,
`std::function`/`Callable`, etc.

There's a possibility for false positives, but it's pretty low.
2017-09-12 08:06:46 +02:00
Dean Moldovan
3c4933cb50 Fix STL casters for containers with proxies (regression)
To avoid an ODR violation in the test suite while testing
both `stl.h` and `std_bind.h` with `std::vector<bool>`,
the `py::bind_vector<std::vector<bool>>` test is moved to
the secondary module (which does not include `stl.h`).
2017-09-10 12:25:10 +02:00
Florian Apolloner
29b99a11a4 Specify CXX as project language for CMake >= 3.4 (#1027) 2017-08-30 14:17:54 +02:00
Dean Moldovan
c40ef612cc Skip boost::variant tests on unsupported compilers and versions of Boost 2017-08-25 21:11:36 +02:00
Henry Schreiner
8b40505575 Utility for redirecting C++ streams to Python (#1009) 2017-08-25 02:12:43 +02:00
Jason Rhinelander
464d98962d Allow binding factory functions as constructors
This allows you to use:

    cls.def(py::init(&factory_function));

where `factory_function` returns a pointer, holder, or value of the
class type (or a derived type).  Various compile-time checks
(static_asserts) are performed to ensure the function is valid, and
various run-time type checks where necessary.

Some other details of this feature:
- The `py::init` name doesn't conflict with the templated no-argument
  `py::init<...>()`, but keeps the naming consistent: the existing
  templated, no-argument one wraps constructors, the no-template,
  function-argument one wraps factory functions.
- If returning a CppClass (whether by value or pointer) when an CppAlias
  is required (i.e. python-side inheritance and a declared alias), a
  dynamic_cast to the alias is attempted (for the pointer version); if
  it fails, or if returned by value, an Alias(Class &&) constructor
  is invoked.  If this constructor doesn't exist, a runtime error occurs.
- for holder returns when an alias is required, we try a dynamic_cast of
  the wrapped pointer to the alias to see if it is already an alias
  instance; if it isn't, we raise an error.
- `py::init(class_factory, alias_factory)` is also available that takes
  two factories: the first is called when an alias is not needed, the
  second when it is.
- Reimplement factory instance clearing.  The previous implementation
  failed under python-side multiple inheritance: *each* inherited
  type's factory init would clear the instance instead of only setting
  its own type value.  The new implementation here clears just the
  relevant value pointer.
- dealloc is updated to explicitly set the leftover value pointer to
  nullptr and the `holder_constructed` flag to false so that it can be
  used to clear preallocated value without needing to rebuild the
  instance internals data.
- Added various tests to test out new allocation/deallocation code.
- With preallocation now done lazily, init factory holders can
  completely avoid the extra overhead of needing an extra
  allocation/deallocation.
- Updated documentation to make factory constructors the default
  advanced constructor style.
- If an `__init__` is called a second time, we have two choices: we can
  throw away the first instance, replacing it with the second; or we can
  ignore the second call.  The latter is slightly easier, so do that.
2017-08-17 09:33:27 -04:00
Dean Moldovan
7918bcc95b Add support for boost::variant in C++11 mode
In C++11 mode, `boost::apply_visitor` requires an explicit `result_type`.
This also adds optional tests for `boost::variant` in C++11/14, if boost
is available. In C++17 mode, `std::variant` is tested instead.
2017-08-12 21:27:44 +02:00
Jason Rhinelander
7437c69500 Add py::module_local() attribute for module-local type bindings
This commit adds a `py::module_local` attribute that lets you confine a
registered type to the module (more technically, the shared object) in
which it is defined, by registering it with:

    py::class_<C>(m, "C", py::module_local())

This will allow the same C++ class `C` to be registered in different
modules with independent sets of class definitions.  On the Python side,
two such types will be completely distinct; on the C++ side, the C++
type resolves to a different Python type in each module.

This applies `py::module_local` automatically to `stl_bind.h` bindings
when the container value type looks like something global: i.e. when it
is a converting type (for example, when binding a `std::vector<int>`),
or when it is a registered type itself bound with `py::module_local`.
This should help resolve potential future conflicts (e.g. if two
completely unrelated modules both try to bind a `std::vector<int>`.
Users can override the automatic selection by adding a
`py::module_local()` or `py::module_local(false)`.

Note that this does mildly break backwards compatibility: bound stl
containers of basic types like `std::vector<int>` cannot be bound in one
module and returned in a different module.  (This can be re-enabled with
`py::module_local(false)` as described above, but with the potential for
eventual load conflicts).
2017-08-04 10:47:34 -04:00