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736 Commits

Author SHA1 Message Date
Ralf W. Grosse-Kunstleve
841369cd7d Merge branch 'master' into sh_merge_master 2024-08-21 21:41:09 -07:00
DWesl
efa2b20d69
docs: clarify requirements for including pybind11 (#5326) 
* DOC: Clarify requirements for including pybind11

Inherited from requirements for including Python.h

Closes #4999

* style: pre-commit fixes

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
 2024-08-22 00:29:21 -04:00
Henry Schreiner
9966ad409d
fix: allow -Wpedantic in C++20 mode (#5322) 
* fix: allow -Wpedantic again

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* tests: ignore pedantic warning for PYBIND11_DECLARE_HOLDER_TYPE

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* tests: try just turning off pedantic for one file

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* tests: only run pedantic in C++20 mode

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update tests/local_bindings.h

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-08-22 00:27:50 -04:00
Ralf W. Grosse-Kunstleve
205da0d7c1 Merge branch 'master' into sh_merge_master 2024-08-14 22:34:20 -07:00
Henry Schreiner
bd5951b691
docs: prepare for 2.13.4 (#5312) 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-08-14 23:57:37 -04:00
Henry Schreiner
28dbce4157
feat: require CMake 3.15+ (#5304) 
* feat: require CMake 3.15+

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Apply suggestions from code review

* Update CMakeLists.txt

* fix: adapt for CMake 3.30+ (using 3.18+)

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-08-14 18:21:04 -04:00
Ralf W. Grosse-Kunstleve
47776dc797 Merge branch 'master' into smart_holder 2024-08-14 00:01:47 -07:00
pwdcd
0116906189
chore: remove repetitive words (#5308) 
Signed-off-by: pwdcd <pwdcd@icloud.com>
 2024-08-13 22:04:10 -07:00
Ralf W. Grosse-Kunstleve
28b016334f Merge branch 'master' into sh_merge_master 2024-08-13 11:45:11 -07:00
Henry Schreiner
4a06eca591 docs: prepare for 2.13.3 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-08-13 13:25:38 -04:00
Henry Schreiner
40f2c7863b
docs: prepare for 2.13.2 (#5299) 
* docs: prepare for 2.13.2

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update changelog.rst

* Update changelog.rst

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-08-13 09:04:03 -04:00
Ralf W. Grosse-Kunstleve
30f633e1f5 Merge branch 'master' into sh_merge_master 2024-08-09 09:48:53 -07:00
fred-sch
916778df48
fix: typo in documentation (#5284) 2024-08-02 12:17:15 -07:00
Ralf W. Grosse-Kunstleve
903b92f9f9 Merge branch 'master' into sh_merge_master 2024-07-30 11:20:28 -07:00
Ralf W. Grosse-Kunstleve
723307283e
feat: remove Python 3.7 support (#5191) 
* First pass updating misc files, informed by https://github.com/pybind/pybind11/pull/5177/commits

* Remove jobs using silkeh/clang and gcc docker containers that come with Python 3.7

* Add silkeh/clang:17-bookworm

* Add job using GCC 7

* Revert "Add job using GCC 7"

This reverts commit 518515a761.

* Try running in ubuntu-18.04 container under ubuntu-latest (to get GCC 7)

* Fix `-` vs `:` mixup.

* This reverts commit b1c4304475.

Revert "Try running in ubuntu:18.04 container under ubuntu-latest (to get GCC 7)"

This reverts commit b203a294bb.

* `git grep 0x03080000` cleanup.

* `git grep -I -E '3\.7'` cleanup.

Removes two changes made under pybind/pybind11#3702

* Revert "`git grep -I -E '3\.7'` cleanup."

This reverts commit bb5b9d187b.

* Remove comments that are evidently incorrect:

```
...
-- The CXX compiler identification is Clang 15.0.7
...
- Found Python: /usr/bin/python3.9 (found suitable version "3.9.2", minimum required is "3.7") found components: Interpreter Development.Module Development.Embed
...
/__w/pybind11/pybind11/include/pybind11/gil.h:150:13: error: 'auto key' can be declared as 'auto *key' [readability-qualified-auto,-warnings-as-errors]
            auto key = internals.tstate;
            ^~~~~
            auto *
/__w/pybind11/pybind11/include/pybind11/gil.h:174:13: error: 'auto key' can be declared as 'auto *key' [readability-qualified-auto,-warnings-as-errors]
            auto key = detail::get_internals().tstate;
            ^~~~~
            auto *
```

* .github/workflows/configure.yml: Change from Python 3.7 to 3.8

* Misc cleanup pass

* Miscellaneous changes based on manual review of the `git grep` matches below:

```
git_grep_37_38.sh |& sort | uniq -c
```

With git_grep_37_38.sh:

```
set -x
git grep 0x0307
git grep 0x0308
git grep PY_MINOR_VERSION
git grep PYPY_VERSION
git grep -I -E '3\.7'
git grep -I -E '3\.8'
git grep -I -E '\(3, 7'
git grep -I -E '\(3, 8'
git grep -I -E '3[^A-Za-z0-9.]+7'
git grep -I -E '3[^A-Za-z0-9.]+8'
```

Output:

```
      1 .appveyor.yml:    $env:CMAKE_INCLUDE_PATH = "eigen-3.3.7;$env:CMAKE_INCLUDE_PATH"
      1 .appveyor.yml:    7z x eigen-3.3.7.zip -y > $null
      1 .appveyor.yml:    Start-FileDownload 'https://gitlab.com/libeigen/eigen/-/archive/3.3.7/eigen-3.3.7.zip'
      1 CMakeLists.txt:    # Bug in macOS CMake < 3.7 is unable to download catch
      1 CMakeLists.txt:  elseif(WINDOWS AND CMAKE_VERSION VERSION_LESS 3.8)
      1 CMakeLists.txt:  if(OSX AND CMAKE_VERSION VERSION_LESS 3.7)
      1 CMakeLists.txt:    message(WARNING "CMAKE 3.7+ needed on macOS to download catch, and newer HIGHLY recommended")
      1 CMakeLists.txt:    message(WARNING "CMAKE 3.8+ tested on Windows, previous versions untested")
      1 CMakeLists.txt:    # Only tested with 3.8+ in CI.
      1 docs/advanced/functions.rst:Python 3.8 introduced a new positional-only argument syntax, using ``/`` in the
      1 docs/changelog.rst:* Adapt pybind11 to a C API convention change in Python 3.8. `#1950
      1 docs/changelog.rst:* Allow thread termination to be avoided during shutdown for CPython 3.7+ via
      1 docs/changelog.rst:  considered as conversion, consistent with Python 3.8+.
      1 docs/changelog.rst:  CPython 3.8 and 3.9 debug builds.
      1 docs/changelog.rst:* Enum now has an ``__index__`` method on Python <3.8 too.
      1 docs/changelog.rst:  on Python 3.8. `#1780 <https://github.com/pybind/pybind11/pull/1780>`_.
      1 docs/changelog.rst:* PyPy 3.10 support was added, PyPy 3.7 support was dropped.
      2 docs/changelog.rst:* Support PyPy 7.3.7 and the PyPy3.8 beta. Test python-3.11 on PRs with the
      1 docs/changelog.rst:* Use ``macos-13`` (Intel) for CI jobs for now (will drop Python 3.7 soon).
      1 docs/changelog.rst:* Use new Python 3.7 Thread Specific Storage (TSS) implementation if available.
      1 docs/compiling.rst:    cmake -DPYBIND11_PYTHON_VERSION=3.8 ..
      1 docs/compiling.rst:    find_package(Python 3.8 COMPONENTS Interpreter Development REQUIRED)
      1 docs/limitations.rst:- PyPy3 7.3.1 and 7.3.2 have issues with several tests on 32-bit Windows.
      1 docs/requirements.txt:idna==3.7 \
      1 + git grep 0x0307
      1 + git grep 0x0308
      1 + git grep -I -E '\(3, 7'
      1 + git grep -I -E '3\.7'
      1 + git grep -I -E '\(3, 8'
      1 + git grep -I -E '3\.8'
      1 + git grep -I -E '3[^A-Za-z0-9.]+7'
      1 + git grep -I -E '3[^A-Za-z0-9.]+8'
      1 + git grep PY_MINOR_VERSION
      1 + git grep PYPY_VERSION
      2 .github/workflows/ci.yml:        - '3.8'
      1 .github/workflows/ci.yml:        - 3.8
      1 .github/workflows/ci.yml:    - name: Add Python 3.8
      1 .github/workflows/ci.yml:        - 'pypy-3.8'
      2 .github/workflows/ci.yml:            python: '3.8'
      1 .github/workflows/ci.yml:          - python: '3.8'
      1 .github/workflows/ci.yml:          - python: 3.8
      1 .github/workflows/ci.yml:            python: 'pypy-3.8'
      1 .github/workflows/configure.yml:          cmake: "3.8"
      1 .github/workflows/configure.yml:    name: 🐍 3.8 • CMake ${{ matrix.cmake }} • ${{ matrix.runs-on }}
      1 .github/workflows/configure.yml:    - name: Setup Python 3.8
      1 .github/workflows/configure.yml:        python-version: 3.8
      1 .github/workflows/pip.yml:    name: 🐍 3.8 • 📦 & 📦 tests • ubuntu-latest
      1 .github/workflows/pip.yml:    name: 🐍 3.8 • 📦 tests • windows-latest
      2 .github/workflows/pip.yml:    - name: Setup 🐍 3.8
      2 .github/workflows/pip.yml:        python-version: 3.8
      2 include/pybind11/cast.h:#if !defined(PYPY_VERSION)
      2 include/pybind11/cast.h:#if defined(PYPY_VERSION)
      2 include/pybind11/cast.h:            // PyPy: 7.3.7's 3.8 does not implement PyLong_*'s __index__ calls.
      5 include/pybind11/detail/class.h:#if !defined(PYPY_VERSION)
      1 include/pybind11/detail/class.h:#if defined(PYPY_VERSION)
      1 include/pybind11/detail/class.h:    // This was not needed before Python 3.8 (Python issue 35810)
      1 include/pybind11/detail/common.h:    && !defined(PYPY_VERSION) && !defined(PYBIND11_ASSERT_GIL_HELD_INCREF_DECREF)
      2 include/pybind11/detail/common.h:#    error "PYTHON < 3.8 IS UNSUPPORTED. pybind11 v2.13 was the last to support Python 3.7."
      1 include/pybind11/detail/common.h:#if defined(PYPY_VERSION) && !defined(PYBIND11_SIMPLE_GIL_MANAGEMENT)
      1 include/pybind11/detail/common.h:#if PY_VERSION_HEX < 0x03080000
      1 include/pybind11/detail/common.h:            = PYBIND11_TOSTRING(PY_MAJOR_VERSION) "." PYBIND11_TOSTRING(PY_MINOR_VERSION);        \
      1 include/pybind11/detail/internals.h:        // called. PYBIND11_TLS_FREE is PyThread_tss_free on python 3.7+. On older python, it does
      1 include/pybind11/detail/internals.h:#if PYBIND11_INTERNALS_VERSION <= 4 || defined(PYPY_VERSION)
      1 include/pybind11/detail/internals.h:// The old Python Thread Local Storage (TLS) API is deprecated in Python 3.7 in favor of the new
      1 include/pybind11/detail/type_caster_base.h:#if defined(PYPY_VERSION)
      1 include/pybind11/embed.h:#    define PYBIND11_PYCONFIG_SUPPORT_PY_VERSION_HEX (0x03080000)
      1 include/pybind11/embed.h:#if defined(PYPY_VERSION)
      1 include/pybind11/eval.h:    // globals if not yet present.  Python 3.8 made PyRun_String behave
      2 include/pybind11/eval.h:#if defined(PYPY_VERSION)
      2 include/pybind11/eval.h:    // was missing from PyPy3.8 7.3.7.
      2 include/pybind11/gil.h:    /// allowed during shutdown. Check _Py_IsFinalizing() on Python 3.7+, and
      1 include/pybind11/pybind11.h:#if !defined(PYPY_VERSION)
      4 include/pybind11/pybind11.h:#if !defined(PYPY_VERSION) && PY_MAJOR_VERSION == 3 && PY_MINOR_VERSION == 9
      1 include/pybind11/pytypes.h:#endif //! defined(PYPY_VERSION)
      2 include/pybind11/pytypes.h:#if !defined(PYPY_VERSION)
      1 include/pybind11/pytypes.h:#    if defined(PYPY_VERSION_NUM) && PYPY_VERSION_NUM < 0x07030a00
      1 include/pybind11/pytypes.h:#ifdef PYPY_VERSION
      1 include/pybind11/stl/filesystem.h:#    if !defined(PYPY_VERSION)
      2 pybind11/__init__.py:if sys.version_info < (3, 8):
      2 pybind11/__init__.py:    msg = "pybind11 does not support Python < 3.8. v2.13 was the last release supporting Python 3.7."
      1 pyproject.toml:master.py-version = "3.8"
      1 pyproject.toml:python_version = "3.8"
      1 README.rst:lines of code and depend on Python (3.8+, or PyPy) and the C++
      2 README.rst:- Python 3.8+, and PyPy3 7.3 are supported with an implementation-agnostic
      1 setup.cfg:    Programming Language :: Python :: 3.8
      1 setup.cfg:python_requires = >=3.8
      1 setup.py:# TODO: use literals & overload (typing extensions or Python 3.8)
      1 tests/CMakeLists.txt:if(NOT CMAKE_VERSION VERSION_LESS 3.8)
      2 tests/constructor_stats.h:#if defined(PYPY_VERSION)
      1 tests/env.py:    doesn't work on CPython 3.8.0 with pytest==3.3.2 on Ubuntu 18.04 (#2922).
      1 tests/requirements.txt:build~=1.0; python_version>="3.8"
      1 tests/requirements.txt:numpy~=1.21.5; platform_python_implementation!="PyPy" and python_version>="3.8" and python_version<"3.10"
      1 tests/requirements.txt:numpy~=1.23.0; python_version=="3.8" and platform_python_implementation=="PyPy"
      1 tests/test_buffers.py:    env.PYPY, reason="PyPy 7.3.7 doesn't clear this anymore", strict=False
      1 tests/test_builtin_casters.py:    # Before Python 3.8, `PyLong_AsLong` does not pick up on `obj.__index__`,
      2 tests/test_builtin_casters.py:    if (3, 8) <= sys.version_info < (3, 10) and env.CPYTHON:
      4 tests/test_builtin_casters.py:    # TODO: PyPy 3.8 does not behave like CPython 3.8 here yet (7.3.7)
      1 tests/test_callbacks.py:    assert m.test_callback3(z.double) == "func(43) = 86"
      2 tests/test_call_policies.cpp:#if !defined(PYPY_VERSION)
      1 tests/test_chrono.py:    diff = m.test_chrono_float_diff(43.789012, 1.123456)
      1 tests/test_constants_and_functions.py:    assert m.f3(86) == 89
      1 tests/test_eigen_matrix.py:    a_copy3[8, 1] = 11
      1 tests/test_eigen_matrix.py:    assert np.all(cornersc == np.array([[1.0, 3], [7, 9]]))
      1 tests/test_eigen_matrix.py:    assert np.all(cornersr == np.array([[1.0, 3], [7, 9]]))
      1 tests/test_eigen_matrix.py:        mymat = chol(np.array([[1.0, 2, 4], [2, 13, 23], [4, 23, 77]]))
      1 tests/test_exceptions.py:    if hasattr(pytest, unraisable):  # Python >= 3.8 and pytest >= 6
      2 tests/test_exceptions.py:@pytest.mark.xfail(env.PYPY, reason="Failure on PyPy 3.8 (7.3.7)", strict=False)
      1 tests/test_factory_constructors.py:    assert [i.alive() for i in cstats] == [13, 7]
      1 tests/test_kwargs_and_defaults.cpp:#ifdef PYPY_VERSION
      1 tests/test_local_bindings.py:    assert i1.get3() == 8
      1 tests/test_methods_and_attributes.cpp:#if !defined(PYPY_VERSION)
      1 tests/test_numpy_array.py:    a = np.arange(3 * 7 * 2) + 1
      1 tests/test_numpy_array.py:    assert str(excinfo.value) == "cannot reshape array of size 42 into shape (3,7,1)"
      2 tests/test_numpy_array.py:    assert x.shape == (3, 7, 2)
      2 tests/test_numpy_array.py:        m.reshape_tuple(a, (3, 7, 1))
      2 tests/test_numpy_array.py:    x = m.reshape_tuple(a, (3, 7, 2))
      1 tests/test_numpy_vectorize.py:    assert np.isclose(m.vectorized_func3(np.array(3 + 7j)), [6 + 14j])
      1 tests/test_pickling.cpp:#if !defined(PYPY_VERSION)
      1 tests/test_pytypes.cpp:#if (defined(__APPLE__) && defined(__clang__)) || defined(PYPY_VERSION)
      1 tests/test_smart_ptr.cpp:    m.def("make_myobject3_1", []() { return new MyObject3(8); });
      1 tests/test_smart_ptr.py:    assert cstats.values() == ["MyObject3[9]", "MyObject3[8]", "MyObject3[9]"]
      1 tests/test_stl_binders.py:    assert v_int2 == m.VectorInt([0, 99, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 88])
      1 tests/test_stl_binders.py:    assert v_int2 == m.VectorInt([0, 99, 2, 3, 4, 5, 6, 7, 0, 1, 2, 3, 88, 4])
      1 tests/test_type_caster_pyobject_ptr.cpp:#if !defined(PYPY_VERSION) // It is not worth the trouble doing something special for PyPy.
      1 tools/FindPythonLibsNew.cmake:  set(PythonLibsNew_FIND_VERSION "3.8")
      1 tools/JoinPaths.cmake:# https://docs.python.org/3.7/library/os.path.html#os.path.join
      1 tools/pybind11NewTools.cmake:    Python 3.8 REQUIRED COMPONENTS ${_pybind11_interp_component} ${_pybind11_dev_component}
      1 tools/pybind11NewTools.cmake:# Python debug libraries expose slightly different objects before 3.8
      1 tools/pybind11Tools.cmake:    "3.12;3.11;3.10;3.9;3.8"
      1 tools/pybind11Tools.cmake:    if(NOT DEFINED PYPY_VERSION)
      1 tools/pybind11Tools.cmake:    message(STATUS "PYPY ${PYPY_VERSION} (Py ${PYTHON_VERSION})")
      1 tools/pybind11Tools.cmake:# Python debug libraries expose slightly different objects before 3.8
      1 tools/pybind11Tools.cmake:      set(PYPY_VERSION
```

* Change `[tool.ruff]` `target-version` to `"py38"`, as suggested by @Skylion007
 2024-07-30 09:18:35 -07:00
Ralf W. Grosse-Kunstleve
5bfe727c3f Merge branch 'master' into sh_merge_master 2024-07-29 11:18:11 -07:00
Theodore Tsirpanis
8e7307f069
docs: remove outdated known limitation. (#5263) 
* Fix typo.

* Remove outdated known limitation.

See #5179.
 2024-07-23 22:32:39 -04:00
Ralf W. Grosse-Kunstleve
b044b4faef Merge branch 'master' into sh_merge_master 2024-07-08 10:08:58 -07:00
dependabot[bot]
50acb81b0a
chore(deps): bump certifi from 2024.2.2 to 2024.7.4 in /docs (#5226) 
Bumps [certifi](https://github.com/certifi/python-certifi) from 2024.2.2 to 2024.7.4.
- [Commits](https://github.com/certifi/python-certifi/compare/2024.02.02...2024.07.04)

---
updated-dependencies:
- dependency-name: certifi
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-07-06 12:22:52 -07:00
Ralf W. Grosse-Kunstleve
08c83b8bec Merge branch 'master' into sh_merge_master 2024-06-26 20:29:59 -07:00
Henry Schreiner
57287b578d
docs: prepare for 2.13.1 (#5203) 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-06-26 18:14:17 -04:00
Ralf W. Grosse-Kunstleve
fb4c618fdb Merge branch 'master' into sh_merge_master 2024-06-26 06:44:15 -07:00
Henry Schreiner
0c69e1eb21
chore: prepare for 2.13.0 (#5198) 
* chore: prepare for 2.13.0

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update changelog.rst

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-06-25 23:51:27 -04:00
Henry Schreiner
9ec64e37c3
docs: prepare for 2.13.0 (#5187) 
* docs: prepare for 2.13.0

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: reword cross-compiling entry

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update changelog.rst

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-06-25 16:24:54 -04:00
Ralf W. Grosse-Kunstleve
d958b789af Merge branch 'master' into sh_merge_master 2024-06-21 22:55:00 -07:00
Ralf W. Grosse-Kunstleve
f1a2e03d19
feat: remove Python 3.6 support (#5177) 
* Change Python version guard: PYTHON < 3.7 IS UNSUPPORTED.

* Replace or remove Python 3.6 jobs.

* Move appveyor to Python 3.8

* Change `[tool.pylint]` `master.py-version` from `3.6` to `3.8`

* Change `[tool.pylint]` `master.py-version` to `3.7`

* Remove `centos:7` job; Change almalinux:8 job to use Python 3.8

* Try 🐍 3.8 • ubuntu-20.04 • x64 without `-DCMAKE_CXX_FLAGS="-D_=1"`

* Update setup.cfg as suggested by @henryiii

* Try running `cmake --build . --target cpptest` on all platforms (`standard` job).

* Disable deadsnakes jobs entirely.

* Apply PR #5179: Add Python 3.10, 3.11, 3.12 to win32 job matrix.

* Add back `-DCMAKE_CXX_FLAGS="-D_=1"` but do not install boost in that case.

* PY_VERSION_HEX < 3.7 cleanup pass: include/pybind11

* WITH_THREAD cleanup pass: include/pybind11

* Undo incorrect change.

* Revert "Disable deadsnakes jobs entirely."

This reverts commit bbcd0087b2.

* WITH_THREAD cleanup pass: tests/

* Change Python version guard in pybind11/__init__.py: pybind11 does not support Python < 3.7.

* Misc cleanup pass

* chore: use future imports

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update tests/test_numpy_array.py

* Update test_numpy_array.py

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-06-22 00:55:00 -04:00
Ralf W. Grosse-Kunstleve
4068f10787 Merge branch 'master' into sh_merge_master 2024-06-19 10:06:18 -07:00
Henry Schreiner
186df220fd
docs: building suggestions update (#5168) 
* docs: building suggestions update

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: address review comments

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-06-18 17:41:54 -04:00
dependabot[bot]
1961b96a8c
chore(deps): bump urllib3 from 2.2.1 to 2.2.2 in /docs (#5170) 
Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.2.1 to 2.2.2.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/2.2.1...2.2.2)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: indirect
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 2024-06-18 00:03:42 -07:00
Ralf W. Grosse-Kunstleve
92abccdd49 Merge branch 'master' into sh_merge_master 2024-05-26 21:14:20 -07:00
dependabot[bot]
b07fddb219
--- (#5130) 
updated-dependencies:
- dependency-name: requests
  dependency-type: indirect
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 2024-05-23 01:41:59 -04:00
dependabot[bot]
750257797c
chore(deps): bump jinja2 from 3.1.3 to 3.1.4 in /docs (#5122) 
Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.3 to 3.1.4.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](https://github.com/pallets/jinja/compare/3.1.3...3.1.4)

---
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- dependency-name: jinja2
  dependency-type: indirect
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 2024-05-06 13:39:26 -04:00
dependabot[bot]
c9747570f5
chore(deps): bump idna from 3.6 to 3.7 in /docs (#5121) 
Bumps [idna](https://github.com/kjd/idna) from 3.6 to 3.7.
- [Release notes](https://github.com/kjd/idna/releases)
- [Changelog](https://github.com/kjd/idna/blob/master/HISTORY.rst)
- [Commits](https://github.com/kjd/idna/compare/v3.6...v3.7)

---
updated-dependencies:
- dependency-name: idna
  dependency-type: indirect
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 2024-05-06 12:59:41 -04:00
nobkd
6497b3f2f2
docs(numpy): drop duplicated ndim (#5119) 2024-05-06 12:42:05 -04:00
Henry Schreiner
a9256a6d25
chore: docs and nox bump (#5071) 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-05-06 12:22:14 -04:00
Tim Stumbaugh
19a6b9f4ef
Fix typo in changelog date (#5096) 
This was actually released in 2024!
 2024-04-09 13:14:49 -07:00
Ralf W. Grosse-Kunstleve
c55ee33c3e Merge branch 'master' into sh_merge_master 2024-03-27 17:12:50 -07:00
Henry Schreiner
7f2214bc68
chore: bump cmake to 3.29 (#5075) 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-03-27 20:11:13 -04:00
Ralf W. Grosse-Kunstleve
826f615365 Merge branch 'master' into sh_merge_master 2024-03-27 17:06:50 -07:00
Henry Schreiner
b91b584da3
docs: remove extra space 
Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-03-27 19:53:55 -04:00
Henry Schreiner
3e9dfa2866
docs: a few missed changes for 2.12 (#5074) 2024-03-27 19:24:54 -04:00
Henry Schreiner
6b5674f36d
chore: prepare 2.12.0 (#5070) 
* chore: prepare 2.12.0

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: more info on numpy 2

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: mention NumPy 2 in README

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: add release date

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* docs: add 4955

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update changelog.rst

* docs: address review comments

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
 2024-03-27 18:09:06 -04:00
Ralf W. Grosse-Kunstleve
47422c53d0 Merge branch 'master' into sh_merge_master 2024-02-20 12:29:08 -08:00
Pascal Thomet
768cebe17e
doc: add litgen to the automatic generators list (compiling.rst) (#5012) 
* doc: add litgen to the automatic generators list (compiling.rst)

Added this:

[litgen]_ is an automatic python bindings generator with a focus on generating
documented and discoverable bindings: bindings will nicely reproduce the documentation
found in headers. It is is based on srcML (srcml.org), a highly scalable, multi-language
parsing tool with a developer centric approach. The API that you want to expose to python
must be C++14 compatible (but your implementation can use more modern constructs).

.. [litgen] https://pthom.github.io/litgen

* style: pre-commit fixes

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 2024-01-28 09:10:03 -08:00
Ralf W. Grosse-Kunstleve
0103ed11e8 Merge branch 'master' into sh_merge_master 2023-12-14 23:14:57 -08:00
Pol Mesalles
daea1130b4
fix(cmake): upgrade maximum supported CMake version to 3.27 (#4786) 
* Upgrade maximum supported CMake version to 3.27 to fix warning with CMP0148 policy (#4785)

* Update `macos_brew_install_llvm` pipeline to use expected Python installation

* Fix `Python_EXECUTABLE` Cmake variable typo

* Apply suggestions from code review

* fix: use FindPython for CMake 3.18+ by default for pybind11's tests

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* tests: fix issues with finding Python

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* tests: also set executable on subdir tests

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* fix(cmake): correct logic for FindPython

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>

* Update ci.yml

* Revert "Update ci.yml"

This reverts commit 33798adf3f.

---------

Signed-off-by: Henry Schreiner <henryschreineriii@gmail.com>
Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
 2023-12-14 14:36:45 -05:00
Ralf W. Grosse-Kunstleve
2c88356284 Merge branch 'master' into sh_merge_master 2023-10-11 21:07:36 -07:00
Ralf W. Grosse-Kunstleve
0e2c3e5db4
Add pybind11/gil_safe_call_once.h (to fix deadlocks in pybind11/numpy.h) (#4877) 
* LazyInitializeAtLeastOnceDestroyNever v1

* Go back to using `union` as originally suggested by jbms@. The trick (also suggested by jbms@) is to add empty ctor + dtor.

* Revert "Go back to using `union` as originally suggested by jbms@. The trick (also suggested by jbms@) is to add empty ctor + dtor."

This reverts commit e7b8c4f0fc.

* Remove `#include <stdalign.h>`

* `include\pybind11/numpy.h(24,10): fatal error C1083: Cannot open include file: 'stdalign.h': No such file or directory`

* @tkoeppe wrote: this is a C interop header (and we're not writing C)

* Suppress gcc 4.8.5 (CentOS 7) warning.

```
include/pybind11/eigen/../numpy.h:63:53: error: dereferencing type-punned pointer will break strict-aliasing rules [-Werror=strict-aliasing]
         return *reinterpret_cast<T *>(value_storage_);
                                                     ^
```

* Replace comments:

Document PRECONDITION.

Adopt comment suggested by @tkoeppe: https://github.com/pybind/pybind11/pull/4877#discussion_r1350356093

* Adopt suggestion by @tkoeppe:

* https://github.com/pybind/pybind11/pull/4877#issuecomment-1752969127

* https://godbolt.org/z/Wa79nKz6e

* Add `PYBIND11_CONSTINIT`, but it does not work for the current use cases:

```
g++ -o pybind11/tests/test_numpy_array.os -c -std=c++20 -fPIC -fvisibility=hidden -O0 -g -Wall -Wextra -Wconversion -Wcast-qual -Wdeprecated -Wundef -Wnon-virtual-dtor -Wunused-result -Werror -isystem /usr/include/python3.11 -isystem /usr/include/eigen3 -DPYBIND11_STRICT_ASSERTS_CLASS_HOLDER_VS_TYPE_CASTER_MIX -DPYBIND11_ENABLE_TYPE_CASTER_ODR_GUARD_IF_AVAILABLE -DPYBIND11_TEST_BOOST -Ipybind11/include -I/usr/local/google/home/rwgk/forked/pybind11/include -I/usr/local/google/home/rwgk/clone/pybind11/include /usr/local/google/home/rwgk/forked/pybind11/tests/test_numpy_array.cpp
```

```
In file included from /usr/local/google/home/rwgk/forked/pybind11/tests/test_numpy_array.cpp:10:
/usr/local/google/home/rwgk/forked/pybind11/include/pybind11/numpy.h: In static member function ‘static pybind11::detail::npy_api& pybind11::detail::npy_api::get()’:
/usr/local/google/home/rwgk/forked/pybind11/include/pybind11/numpy.h:258:82: error: ‘constinit’ variable ‘api_init’ does not have a constant initializer
  258 |         PYBIND11_CONSTINIT static LazyInitializeAtLeastOnceDestroyNever<npy_api> api_init;
      |                                                                                  ^~~~~~~~
```

```
In file included from /usr/local/google/home/rwgk/forked/pybind11/tests/test_numpy_array.cpp:10:
/usr/local/google/home/rwgk/forked/pybind11/include/pybind11/numpy.h: In static member function ‘static pybind11::object& pybind11::dtype::_dtype_from_pep3118()’:
/usr/local/google/home/rwgk/forked/pybind11/include/pybind11/numpy.h:697:13: error: ‘constinit’ variable ‘imported_obj’ does not have a constant initializer
  697 |             imported_obj;
      |             ^~~~~~~~~~~~
```

* Revert "Add `PYBIND11_CONSTINIT`, but it does not work for the current use cases:"

This reverts commit f07b28bda9.

* Reapply "Add `PYBIND11_CONSTINIT`, but it does not work for the current use cases:"

This reverts commit 36be645758.

* Add Default Member Initializer on `value_storage_` as suggested by @tkoeppe:

https://github.com/pybind/pybind11/pull/4877#issuecomment-1753201342

This fixes the errors reported under commit f07b28bda9.

* Fix copy-paste-missed-a-change mishap in commit 88cec1152a.

* Semi-paranoid placement new (based on https://github.com/pybind/pybind11/pull/4877#discussion_r1350573114).

* Move PYBIND11_CONSTINIT to detail/common.h

* Move code to the right places, rename new class and some variables.

* Fix oversight: update tests/extra_python_package/test_files.py

* Get the name right first.

* Use `std::call_once`, `std::atomic`, following a pattern developed by @tkoeppe

* Make the API more self-documenting (and possibly more easily reusable).

* google-clang-tidy IWYU fixes

* Rewrite comment as suggested by @tkoeppe

* Update test_exceptions.cpp and exceptions.rst

* Fix oversight in previous commit: add `PYBIND11_CONSTINIT`

* Make `get_stored()` non-const for simplicity.

As suggested by @tkoeppe: not seeing any reasonable use in which `get_stored` has to be const.

* Add comment regarding `KeyboardInterrupt` behavior, based heavily on information provided by @jbms.

* Add `assert(PyGILState_Check())` in `gil_scoped_release` ctor (simple & non-simple implementation) as suggested by @EthanSteinberg.

* Fix oversight in previous commit (missing include cassert).

* Remove use of std::atomic, leaving comments with rationale, why it is not needed.

* Rewrite comment re `std:optional` based on deeper reflection (aka 2nd thoughts).

* Additional comment with the conclusion of a discussion under PR #4877.

* https://github.com/pybind/pybind11/pull/4877#issuecomment-1757363179

* Small comment changes suggested by @tkoeppe.
 2023-10-11 21:05:31 -07:00
Ralf W. Grosse-Kunstleve
35b26794ec Merge branch 'master' into sh_merge_master 2023-09-10 10:49:38 -07:00
pre-commit-ci[bot]
467fe27bd9
chore(deps): update pre-commit hooks (#4838) 
* chore(deps): update pre-commit hooks

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.281 → v0.0.287](https://github.com/astral-sh/ruff-pre-commit/compare/v0.0.281...v0.0.287)
- [github.com/pre-commit/mirrors-mypy: v1.4.1 → v1.5.1](https://github.com/pre-commit/mirrors-mypy/compare/v1.4.1...v1.5.1)
- [github.com/asottile/blacken-docs: 1.15.0 → 1.16.0](https://github.com/asottile/blacken-docs/compare/1.15.0...1.16.0)
- [github.com/Lucas-C/pre-commit-hooks: v1.5.1 → v1.5.4](https://github.com/Lucas-C/pre-commit-hooks/compare/v1.5.1...v1.5.4)
- [github.com/PyCQA/pylint: v3.0.0a6 → v3.0.0a7](https://github.com/PyCQA/pylint/compare/v3.0.0a6...v3.0.0a7)

* style: pre-commit fixes

* Update pyproject.toml

---------

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 2023-09-06 06:04:27 -07:00