The instance registration for offset base types fails (under macOS, with
a segfault) in the presense of virtual base types. The issue occurs
when trying to `static_cast<Base *>(derived_ptr)` when `derived_ptr` has
been allocated (via `operator new`) but not initialized.
This commit fixes the issue by moving the addition to
`registered_instances` into `init_holder` rather than immediately after
value pointer allocation.
This also renames it to `init_instance` since it does more than holder
initialization now. (I also further renamed `init_holder_helper` to
`init_holder` since `init_holder` isn't used anymore).
Fixes#959.
This fixes#856. Instead of the weakref trick, the internals structure
holds an unordered_map from PyObject* to a vector of references. To
avoid the cost of the unordered_map lookup for objects that don't have
any keep_alive patients, a flag is added to each instance to indicate
whether there is anything to do.