Commit Graph

671 Commits

Author SHA1 Message Date
Jeremy Maitin-Shepard
14976c853b
Eliminate duplicate TLS keys for loader_life_support stack (#3275)
* Eliminate duplicate TLS keys for loader_life_support stack

This revises the existing fix for
https://github.com/pybind/pybind11/issues/2765 in
https://github.com/pybind/pybind11/pull/3237 to reduce the amount of
TLS storage used.

The shared TLS key is stored in two different ways, depending on
`PYBIND11_INTERNALS_VERSION`.  If `PYBIND11_INTERNALS_VERSION ==
4` (as is currently set), the TLS key is stored in the
`internal::shared_data` map to avoid breaking ABI compatibility.  If
`PYBIND11_INTERNALS_VERSION > 4`, the TLS key is stored directly in
the `internals` struct.

* Fix test_pytypes.py::test_issue2361 failure on PyPy3.7

* Add github actions tests for unstable ABI
2021-09-20 04:57:38 -07:00
Ralf W. Grosse-Kunstleve
6c65ab5950
Follow-on to PR #3254, to address user code breakages. (#3263)
* Restoring `const` removed from pytypes.h in PR #3254, adding tests reflective of user code that breaks when those `const` are removed.

* clang-tidy NOLINTs (and one collateral fix).

* Inserting PYBIND11_CONST_FOR_STRICT_PLATFORMS

* Trying `defined(__APPLE__)`

* Trying again: `auto it` for strict platforms.

* Adding NOLINTNEXTLINE(bugprone-macro-parentheses), expanding comments.

* Labeling all changes with `PR #3263`, for easy reference, and to make it easy to undo these changes if we decide to do so in the future.
2021-09-12 19:53:26 -07:00
Laramie Leavitt
0e599589fe
Fix thread safety for pybind11 loader_life_support (#3237)
* Fix thread safety for pybind11 loader_life_support

Fixes issue: https://github.com/pybind/pybind11/issues/2765

This converts the vector of PyObjects to either a single void* or
a per-thread void* depending on the WITH_THREAD define.

The new field is used by each thread to construct a stack
of loader_life_support frames that can extend the life of python
objects.

The pointer is updated when the loader_life_support object is allocated
(which happens before a call) as well as on release.

Each loader_life_support maintains a set of PyObject references
that need to be lifetime extended; this is done by storing them
in a c++ std::unordered_set and clearing the references when the
method completes.

* Also update the internals version as the internal struct is no longer compatible

* Add test demonstrating threading works correctly.

It may be appropriate to run this under msan/tsan/etc.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* Update test to use lifetime-extended references rather than
std::string_view, as that's a C++ 17 feature.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Make loader_life_support members private

* Update version to dev2

* Update test to use python threading rather than concurrent.futures

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Remove unnecessary env in test

* Remove unnecessary pytest in test

* Use native C++ thread_local in place of python per-thread data structures to retain compatability

* clang-format test_thread.cpp

* Add a note about debugging the py::cast() error

* thread_test.py now propagates exceptions on join() calls.

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* remove unused sys / merge

* Update include order in test_thread.cpp

* Remove spurious whitespace

* Update comment / whitespace.

* Address review comments

* lint cleanup

* Fix test IntStruct constructor.

* Add explicit to constructor

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-09-10 12:29:21 -04:00
Aaron Gokaslan
ae07d4c6c6
maint(Clang-Tidy): readability-const-return (#3254)
* Enable clang-tidy readability-const-return

* PyTest functional

* Fix regression

* Fix actual regression

* Remove one more NOLINT

* Update comment
2021-09-09 21:27:36 -07:00
Aaron Gokaslan
4c6bee3514
fix: Set __file__ constant when using eval_file (#1300) (#3233)
* Set __file__ constant when using eval_file

* Use const ref

* Use a move instead

* Revert

* Improve test

* Guard test with Python version

* Fix tests

* Dont support Python2 API

* Drop Python2 eval __file__ support

* Hack

* Semisupport Python2

* Take2

* Remove Python2 support
2021-09-09 14:06:33 -04:00
Ralf W. Grosse-Kunstleve
6abf2baa62
CodeHealth: Enabling clang-tidy google-explicit-constructor (#3250)
* Adding google-explicit-constructor to .clang-tidy

* clang-tidy explicit attr.h (all automatic)

* clang-tidy explicit cast.h (all automatic)

* clang-tidy detail/init.h (1 NOLINT)

* clang-tidy detail/type_caster_base.h (2 NOLINT)

* clang-tidy pybind11.h (7 NOLINT)

* clang-tidy detail/common.h (3 NOLINT)

* clang-tidy detail/descr.h (2 NOLINT)

* clang-tidy pytypes.h (23 NOLINT, only 1 explicit)

* clang-tidy eigen.h (7 NOLINT, 0 explicit)

* Adding 2 explicit in functional.h

* Adding 4 explicit in iostream.h

* clang-tidy numpy.h (1 NOLINT, 1 explicit)

* clang-tidy embed.h (0 NOLINT, 1 explicit)

* clang-tidy tests/local_bindings.h (0 NOLINT, 4 explicit)

* clang-tidy tests/pybind11_cross_module_tests.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/pybind11_tests.h (0 NOLINT, 2 explicit)

* clang-tidy tests/test_buffers.cpp (0 NOLINT, 2 explicit)

* clang-tidy tests/test_builtin_casters.cpp (0 NOLINT, 4 explicit)

* clang-tidy tests/test_class.cpp (0 NOLINT, 6 explicit)

* clang-tidy tests/test_copy_move.cpp (0 NOLINT, 7 explicit)

* clang-tidy tests/test_embed/external_module.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/test_embed/test_interpreter.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/object.h (0 NOLINT, 2 explicit)

* clang-tidy batch of fully automatic fixes.

* Workaround for MSVC 19.16.27045.0 C++17 Python 2 C++ syntax error.
2021-09-08 18:53:38 -07:00
Ralf W. Grosse-Kunstleve
49173e472f
Minor follow-on to PR #1334 (Fix enum value's __int__ returning non-int when underlying type is bool or of char type) (#3232)
* Minor tweaks.

* Restoring tests/pybind11_tests.h version from master, removing just the comment and empty line that was added in PR #3087; those were made obsolete by the pragma cleanup that concluded with PR #3186.

* More-to-the-point test for Python 3.
2021-08-31 08:52:04 -07:00
Ralf W. Grosse-Kunstleve
a46f623782
Minor tweaks. (#3230)
* Minor tweaks.

* Restoring tests/pybind11_tests.h version from master, removing just the comment and empty line that was added in PR #3087; those were made obsolete by the pragma cleanup that concluded with PR #3186.

* [ci skip] Restoring tests/test_enum.py from master.
2021-08-31 06:44:14 -07:00
Tailing Yuan
d6474ed7d2
fix: memory leak in cpp_function (#3228) (#3229)
* fix: memory leak in cpp_function (#3228)

* add a test case to check objects are deconstructed in cpp_function

* update the test case about cpp_function

* fix the test case about cpp_function: remove "noexcept"

* Actually calling func. CHECK(stat.alive() == 2); Manually verified that the new tests fails without the change in pybind11.h

* Moving new test to test_callbacks.cpp,py, with small enhancements.

* Removing new test from test_interpreter.cpp (after it was moved to test_callbacks.cpp,py). This restores test_interpreter.cpp to the current state on master.

* Using py::detail::silence_unused_warnings(py_func); to make the intent clear.

Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-08-30 21:48:33 -04:00
Ralf W. Grosse-Kunstleve
777352fcd1
Adding ssize_t_cast to support passing size_t or ssize_t values where ssize_t is needed. (#3219)
* Trivial change to avoid (ssize_t) cast.

* Demo for safe_ssize_t idea.

* Removing safe_ssize_t.cpp (proof-of-concept code) to not upset the GHA Format workflow.

* Completing changes in pytypes.h

* New ssize_t_cast (better replacement for safe_ssize_t).

* clang-format-diff (no manual changes).

* bytes_ssize_t -Wnarrowing reproducer (see PR #2692).

* Backing out tuple(), list() ssize_t support, for compatibility with older compilers (to resolve link failures).

* Bug fix: missing `py::` for `py::ssize_t`

* Restoring tuple(), list() ssize_t support, but passing `size` by value, for compatibility with older compilers (to resolve link failures).

* Full test coverage of all functions with modified signatures.
2021-08-28 16:40:46 -07:00
Ye Zhihao
cb60ed49e4
Fix enum value's __int__ returning non-int when underlying type is bool or of char type (#1334)
* Use equivalent_integer for enum's Scalar decision

* Add test for char underlying enum

* Support translating bool type in enum's Scalar

* Add test for bool underlying enum

* Fix comment in test

* Switch from `PYBIND11_CPP20` macro to `PYBIND11_HAS_U8STRING`

* Refine tests

Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-08-26 14:34:24 -07:00
Dan
930bb16c79
Call PySys_SetArgv when initializing interpreter. (#2341)
* Call PySys_SetArgv when initializing interpreter.

* Document argc/argv parameters in initialize_interpreter.

* Remove manual memory management from set_interpreter_argv in favor of smart pointers.

* Use size_t for indexers in set_interpreter_argv.

* Minimize macros for flow control in set_interpreter_argv.

* Fix 'unused variable' warning on Py2

* whitespace

* Define wide_char_arg_deleter outside set_interpreter_argv.

* Do sys.path workaround in C++ rather than eval.

* Factor out wchar conversion to a separate function.

* Restore widened_argv variable declaration.

* Fix undeclared widened_arg variable on some paths.

* Use delete[] to match new wchar_t[].

* Fix compiler errors

* Use PY_VERSION_HEX for a cleaner CVE-2008-5983 mode check.

* Fix typo

* Use explicit type for deleter so delete[] works cross-compiler.

* Always use PySys_SetArgvEx because pybind11 doesn't support pythons that don't include it.

* Remove pointless ternary operator.

* Use unique_ptr.reset instead of a second initialization.

* Rename add_program_dir_to_path parameter to clarify intent.

* Add defined() check before evaluating HAVE_BROKEN_MBSTOWCS.

* Apply clang-tidy fixes

* Pre-commit

* refactor: use const for set_interpreter_argv

* Try to fix const issue and allocate vector properly

* fix: copy strings on Python 2

* Applying clang-format-diff relative to master.

The only manual change is an added empty line between pybind11 and system `#include`s.

```
git diff -U0 --no-color master | python3 $HOME/clone/llvm-project/clang/tools/clang-format/clang-format-diff.py -p1 -style=file -i
```

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-08-26 14:12:54 -07:00
Nick Cullen
503ff2a6fb
view for numpy arrays (#987)
* reshape

* more tests

* Update numpy.h

* Update test_numpy_array.py

* array view

* test

* Update test_numpy_array.cpp

* Update numpy.h

* Update numpy.h

* Update test_numpy_array.cpp

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix merge bug

* Make clang-tidy happy

* Add xfail for PyPy

* Fix casting issue

* Fix formatting

* Apply clang-tidy

* Address reviews on additional tests

* Fix ordering

* Do a little more reordering

* Fix typo

* Try improving tests

* Fix error in reshape

* Add one more reshape test

* Fix bugs and add test

* Relax test

* streamlining new tests; removing a few stray msg

* Fix style revert

* Fix clang-tidy

* Misc tweaks:
* Comment: matching style in file (///), responsibility sentence, consistent punctuation.
* Replacing `unsigned char` with `uint8_t` for max consistency.
* Removing `1` from `array_view1` because there is only one.

* Partial clang-format-diff.

Co-authored-by: ncullen93 <ncullen.th@dartmouth.edu>
Co-authored-by: NC Cullen <nicholas.c.cullen.th@dartmouth.edu>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ralf Grosse-Kunstleve <rwgk@google.com>
2021-08-26 14:11:01 -07:00
Henry Schreiner
db44afa33b
tests: fix pytest usage on Python 3.10 (#3221) 2021-08-26 10:52:13 -07:00
Nick Cullen
59ad1e7d05
reshape for numpy arrays (#984)
* reshape

* more tests

* Update numpy.h

* Update test_numpy_array.py

* Update numpy.h

* Update numpy.h

* Update test_numpy_array.cpp

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix merge bug

* Make clang-tidy happy

* Add xfail for PyPy

* Fix casting issue

* Address reviews on additional tests

* Fix ordering

* Do a little more reordering

* Fix typo

* Try improving tests

* Fix error in reshape

* Add one more reshape test

* streamlining new tests; removing a few stray msg

Co-authored-by: ncullen93 <ncullen.th@dartmouth.edu>
Co-authored-by: NC Cullen <nicholas.c.cullen.th@dartmouth.edu>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ralf Grosse-Kunstleve <rwgk@google.com>
2021-08-26 08:12:35 -07:00
Jouke Witteveen
031a700dfd
Add make_simple_namespace function and tests (#2840)
Co-authored-by: Jouke Witteveen <j.witteveen@cosine.nl>
2021-08-26 08:04:22 -07:00
Ralf W. Grosse-Kunstleve
c8ce4b8df8
Clone of @virtuald's PR #2112 with minor enhancements. (#3215)
* Add py::raise_from to enable chaining exceptions on Python 3.3+

* Use 'raise from' in initialization

* Documenting the exact base version of _PyErr_FormatVFromCause, adding back `assert`s.

Co-authored-by: Dustin Spicuzza <dustin@virtualroadside.com>
2021-08-23 17:30:01 -07:00
Liam Keegan
4f29b8a45b
ci: extend msys2 mingw CI (#3207)
* extend msys2 CI

- add 32-bit job
- add c++11/17 c++/interface tests copied from standard ci
- add numpy/scipy

* account for padding of PartialStruct in numpy dtypes test with mingw32

* [pre-commit.ci] auto fixes from pre-commit.com hooks

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* msys2 ci: add c++14 tests

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2021-08-19 14:42:55 -04:00
Ralf W. Grosse-Kunstleve
998d45e431
Cleanup of file-scoped and globally-scoped warning suppression pragmas across pybind11 header files. (#3201)
* Removing all MSVC C4127 warning suppression pragmas.

* Removing MSVC /WX (WERROR). To get a full list of all warnings.

* Inserting PYBIND11_SILENCE_MSVC_C4127. Changing one runtime if to #if.

* Changing PYBIND11_SILENCE_MSVC_C4127 macro to use absolute namespace (for use outside pybind11 include directory).

* Restoring MSVC /WX (WERROR).

* Removing globally-scoped suppression for clang -Wunsequenced. Based on an experiment under PR #3202 it is obsolete and can simply be removed.
2021-08-19 11:37:04 -07:00
Aaron Gokaslan
9df2f1ff13
maint(precommit): Apply isort (#3195)
* Apply isort

* Tweak isort config

* Add env.py as a known_first_party

* Add one missing known first party

* Make config compat with older isort versions

* Add another comment

* Revert pyproject setting
2021-08-13 12:37:05 -04:00
Eric Cousineau
6ac8efe52d
test_eval: Show example of working closure (#2743)
* test_eval: Show example of working closure

* Extend test_eval_closure with weirder examples of closures for py::eval

Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-08-06 15:51:53 -04:00
Aaron Gokaslan
3893f37bce
maint(clang-tidy): Bugprone enable checks (#3166)
* Enable bugprone checks

* Reset delta and massage config

* Start to apply bugprone fixes

* try to fix minor bug

* Fix later

* Fix perfect forwarding bugprone

* Remove nolint

* undo constructor delete

* Fix bugprone-perfect-forwarding again

* Remove TODO

* Add another nolint for bugprone-exception-escape in scoped interpreter

* Fix remaining bugprone errors

* Properly apply bugprone-macro-parantheses

* Redo formatting and remove bugprone nolint

* Add coment and revert more whitespace changes

* Fix typo

* Fix parsing bug

* Add back comma

* Fix clang-tidy issue

* Apply remaining clang-tidy fixes
2021-08-06 14:30:28 -04:00
Jerome Robert
9e8a741baa
fix: Mingw64 corrected and add a CI job to test it (#3132)
* mingw64 platform string is like mingw_xxx not "mingw"

See https://github.com/msys2/MINGW-packages/blob/master/mingw-w64-python/0099-Change-the-get_platform-method-in-sysconfig-and-dist.patch

* Mingw: Do not dllexport exceptions

This is a fix for errors like:

D:/a/pybind11/pybind11/include/pybind11/detail/common.h:735:23: error: 'dllexport' implies default visibility, but 'class pybind11::builtin_exception' has already been declared with a different visibility
  735 | class PYBIND11_EXPORT builtin_exception : public std::runtime_error {
      |                       ^~~~~~~~~~~~~~~~~

* GHA: Test Mingw64 build

* fix: avoid thin binaries on mingw

* fix: drop lto on MinGW

* Mingw64: disable PYBIND11_DEPRECATED

It trigger many warnings for unknown reasons

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-07-30 13:48:41 -04:00
Henry Schreiner
c14b193308
chore: increase CMake upper limit (#3124) 2021-07-28 18:04:14 -07:00
Ralf W. Grosse-Kunstleve
2164c2e0e7
Removing __INTEL_COMPILER section from pragma block at the top of pybind11.h (#3135)
* Fixing `pragma warning pop` for `__INTEL_COMPILER`.

* Adding push/pop to 3 tests. Removing #878 from top of pybind11.h (it was/is only needed for 1 test).

* Trying again after CI failure, moving the push to the top of 2 tests.

* Trying more after CI failure, adding push/pop to pybind11_tests.h, constructor_stats.h.

* Moving ICC #2196 suppression to CMakeLists.txt

* Fixing condition for `pragma GCC diagnostic push` in pybind11.h

* Moving `pragma warning disable 2196` to common.h

* Revising #ifdef to be more conservative.

* Undoing insertion of notes that will hopefully soon be completely obsolete anyway.
2021-07-27 15:33:31 -07:00
Aaron Gokaslan
9beaa925db
maint(clang-tidy): Improve code readability with explicit boolean casts (#3148)
* maint(clang-tidy) Improve code readability

* Fix minor typos

* Revert optimization that removed test case

* Fix comment formatting

* Revert another optimization to repro an issue

* Remove make_unique since it C++14 and newer only

* eformat comments

* Fix unsignedness of comparison

* Update comment
2021-07-27 15:32:26 -07:00
Henry Schreiner
7cc0ebb475
fix: the CMake config in Python package had a hard coded path (#3144) 2021-07-27 17:23:52 -04:00
David Hewitt
a0b975965f
Allow python builtins to be used as callbacks (#1413)
* Allow python builtins to be used as callbacks

* Try to fix pypy segfault

* Add expected fail for PyPy

* Fix typo

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add more info to xfail

* Add env

* Try returning false

* Try removing the move for pypy

* Fix bugs

* Try removing move

* Just keep ignoring for PyPy

* Add back xfail

* Fix ctors

* Revert change of std::move

* Change to skip

* Fix bug and edit comments

* Remove clang-tidy bugprone fix skip bug

Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
2021-07-27 14:16:28 -04:00
jesse-sony
d65edfb024
Feature/local exception translator (#2650)
* Create a module_internals struct

Since we now have two things that are going to be module local, it felt
correct to add a struct to manage them.

* Add local exception translators

These are added via the  register_local_exception_translator function
and are then applied before the global translators

* Add unit tests to show the local exception translator works

* Fix a bug in the unit test with the string value of KeyError

* Fix a formatting issue

* Rename registered_local_types_cpp()

Rename it to get_registered_local_types_cpp() to disambiguate from the
new member of module_internals

* Add additional comments to new local exception code path

* Add a register_local_exception function

* Add additional unit tests for register_local_exception

* Use get_local_internals like get_internals

* Update documentation for new local exception feature

* Add back a missing space

* Clean-up some issues in the docs

* Remove the code duplication when translating exceptions

Separated out the exception processing into a standalone function in the
details namespace.

Clean-up some comments as per PR notes as well

* Remove the code duplication in register_exception

* Cleanup some formatting things caught by clang-format

* Remove the templates from exception translators

But I added a using declaration to alias the type.

* Remove the extra local from local_internals variable names

* Add an extra explanatory comment to local_internals

* Fix a typo in the code
2021-07-21 05:22:18 -07:00
Henry Schreiner
cd061aeef1
style: pre-commit cleanup (#3111)
* style: disallow PyTest (should be pytest)

* style: cleanup spell checking a bit

* style: add a few items to the .gitignore
2021-07-14 16:49:13 -04:00
Shane Loretz
7331d381af
Raise codec errors when casting to std::string (#2903)
* Raise codec errors when casting to std::string

Allow the codec's exception to be raised instead of RuntimeError when
casting from py::str to std::string.

PY2 allows ucs surrogates in UTF-8 conversion

Signed-off-by: Shane Loretz <sloretz@openrobotics.org>
Signed-off-by: Shane Loretz <sloretz@osrfoundation.org>

* Attempt to fix py2 error

* Revert all unicode literals

* Fixed

Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-07-13 21:21:55 -07:00
Ralf W. Grosse-Kunstleve
aca6c3ba37
* Removing stray semicolons (discovered by running clang-format v12 followed by tools/check-style.sh). (#3087)
* Manually moving `// NOLINT` comments so that clang-format does not move them to the wrong places.

* Manually reformatting comments related to `static_assert`s so that clang-format does not need two passes.

* Empty lines between #includes, to prevent clang-format from shuffling the order and thereby confusing MSVC 2015.

* git diff -U0 --no-color HEAD^ | python3 $HOME/clone/llvm-project/clang/tools/clang-format/clang-format-diff.py -p1 -style=file -i
2021-07-13 18:14:58 -07:00
Antony Lee
1be0a0a610
Add helper to build in-tree extensions. (#2831)
For single-file extensions, a convenient pattern offered by cython
is to place the source files directly in the python source tree
(`foo/__init__.py`, `foo/ext.pyx`), deriving the package names from
their filesystem location.  Adapt this pattern for pybind11, using an
`intree_extensions` helper, which should be thought of as the moral
equivalent to `cythonize`.

Differences with cythonize: I chose not to include globbing support
(`intree_extensions(glob.glob("**/*.cpp"))` seems sufficient), nor to
provide extension-customization kwargs (directly setting the attributes
on the resulting Pybind11Extension objects seems sufficient).

We could choose to have `intree_extension` (singular instead) and make
users write `[*map(intree_extension, glob.glob("**/*.cpp"))]`; no strong
opinion here.

Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-07-13 17:21:55 -04:00
Aaron Gokaslan
25e470c57d
fix(clang-tidy): Add cppcoreguidelines-init-vars,slicing, and throw-by-value-catch-by-reference checks (#3094)
* clang-tidy: guard against more UB behavior

* Remove slicing check for now
2021-07-13 09:54:32 -04:00
Henry Schreiner
0e2e003508 style: add pyupgrade check, 2.7+ 2021-07-12 21:46:24 -04:00
Henry Schreiner
84fdadfbcc chore: update pre-commit hooks 2021-07-12 21:46:24 -04:00
Ralf W. Grosse-Kunstleve
75090647ce
More precise return_value_policy::automatic documentation. (#2920)
* Adding test_return_vector_bool_raw_ptr to test_stl.py.

* First attempt to make the documentation more accurate, but not trying to be comprehensive, to not bloat the reference table with too many details.

* Fixing minor oversights.

* Applying reviewer suggestion.
2021-07-12 16:56:10 -07:00
Ralf W. Grosse-Kunstleve
7472d37a93
Adding iostream.h thread-safety documentation. (#2995)
* Adding iostream.h thread-safety documentation.

* Restoring `TestThread` code with added `std::lock_guard<std::mutex>`.

* Updating new comments to reflect new information.

* Fixing up `git rebase -X theirs` accidents.
2021-07-12 13:39:06 -07:00
Ralf W. Grosse-Kunstleve
2d468697d9
NOLINT reduction (#3096)
* Copying from prework_no_rst branch (PR #3087): test_numpy_array.cpp, test_stl.cpp

* Manual changes reducing NOLINTs.

* clang-format-diff.py

* Minor adjustment to avoid MSVC warning C4702: unreachable code
2021-07-12 13:10:28 -07:00
Ralf W. Grosse-Kunstleve
bac5a0c370
Go all the way fixing clang-tidy issues to avoid the NOLINTNEXTLINE clutter and clang-format issues. This was really meant to be part of PR #3051 but was held back either out of an abundance of caution, or because of confusion caused by stray semicolons. (#3086) 2021-07-09 14:09:56 -07:00
Aaron Gokaslan
b5357d1fa8
fix(clang-tidy): Enable clang-tidy else-after-return and redundant void checks (#3080)
* Enable clang-tidy else-after-return and redundant void checks

* Fix remaining else-after

* Address reviewer comments

* Fix indentation

* Rerun clang-tidy post merge
2021-07-09 06:45:53 -07:00
Ralf W. Grosse-Kunstleve
6d1b197b46
Splitting out pybind11/stl/filesystem.h. (#3077)
* Splitting out pybind11/stl/filesystem.h.

To solve breakages like: https://github.com/deepmind/open_spiel/runs/2999582108

Mostly following the suggestion here: https://github.com/pybind/pybind11/pull/2730#issuecomment-750507575

Except using pybind11/stl/filesystem.h instead of pybind11/stlfs.h, as decided via chat.

stl.h restored to the exact state before merging PR #2730 via:
```
git checkout 733f8de24f stl.h
```

* Properly including new stl subdirectory in pip wheel config.

This now passes interactively:
```
pytest tests/extra_python_package/
```

* iwyu cleanup.

iwyuh.py -c -std=c++17 -DPYBIND11_TEST_BOOST -Ipybind11/include -I/usr/include/python3.9 -I/usr/include/eigen3 include/pybind11/stl/filesystem.h

* Adding PYBIND11_HAS_FILESYSTEM_IS_OPTIONAL.

* Eliminating else after return.
2021-07-08 09:02:48 -07:00
Robert Haschke
c090c8c409
Unify cast_error message thrown by [simple|unpacking]_collector (#3013)
* Unify cast_error message thrown by [simple|unpacking]_collector

simple_collector and unpacking_collector throw different error messages
when the casting of an argument failed: While the former mentions make_tuple(),
the latter emphasises the call argument (and its name/position).

* Consolidating "Unable to convert call argument" error reporting code to guarantee uniformity.

Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-07-06 15:13:13 -07:00
luzpaz
8bee61b645
docs: fix various typos (#3075)
Found via `codespell -q 3 -L nd,ot,thist`
2021-07-04 19:58:35 -04:00
Antony Lee
5bcaaa0423
Add a std::filesystem::path <-> os.PathLike caster. (#2730) 2021-07-02 07:00:50 -07:00
Ralf W. Grosse-Kunstleve
cad79c1146
tests: remove very minor oversight in PR #3059. (#3066) 2021-06-30 17:30:26 -04:00
Ralf W. Grosse-Kunstleve
fbae8f313b
pickle setstate: setattr __dict__ only if not empty (#2972)
* pickle setstate: setattr __dict__ only if not empty, to not force use of py::dynamic_attr() unnecessarily.

* Adding unit test.

* Clang 3.6 & 3.7 compatibility.

* PyPy compatibility.

* Minor iwyu fix, additional comment.

* Addressing reviewer requests.

* Applying clang-tidy suggested fixes.

* Adding check_dynamic_cast_SimpleCppDerived, related to issue #3062.
2021-06-30 12:34:32 -07:00
Cris Luengo
93e69191c1
fix: enable py::implicitly_convertible<py::none, ...> for py::class_-wrapped types (#3059)
* Allow casting from None to a custom object, closes #2778

* ci.yml patch from the smart_holder branch for full CI coverage.
2021-06-25 17:56:17 -07:00
Aaron Gokaslan
dac74ebdf5
fix(clang-tidy): performance fixes applied in tests and CI (#3051)
* Initial fixes

* Whoops

* Finish clang-tidy manual fixes

* Add two missing fixes

* Revert

* Update clang-tidy

* Try to fix unreachable code error

* Move nolint comment

* Apply missing fix

* Don't override clang-tidy config

* Does this fix clang-tidy?

* Make all clang-tidy errors visible

* Add comments about NOLINTs and remove a few

* Fix typo
2021-06-22 12:11:54 -04:00
Aaron Gokaslan
3b30b0a51e
fix(clang-tidy): clang-tidy readability and misc fixes, like adding const (#3052)
* Enable and apply clang-tidy readability and misc fixes.

* Revert deprecated tester

* add space to tests/test_constants_and_functions.cpp
2021-06-21 10:37:48 -04:00
Aaron Gokaslan
e0b5cbd4c6
chore(clang-tidy): add more modernize clang-tidy checks (#3049)
* Add more modernize clang-tidy checks

* Enable a few more
2021-06-19 18:38:56 -04:00
Jack S. Hale
4c7697dbe9
Add const T to docstring generation. (#3020)
* Add const T to docstring generation.

* Change order.

* See if existing test triggers for a const type.

* Add tests.

* Fix test.

* Remove experiment.

* Reformat.

* More tests, checks run.

* Adding `test_fmt_desc_` prefix to new test functions.

* Using pytest.mark.parametrize to 1. condense test; 2. exercise all functions even if one fails; 3. be less platform-specific (e.g. C++ float is not necessarily float32).

Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-06-08 11:56:45 -07:00
Ralf W. Grosse-Kunstleve
e25b1505db
Adjusting valgrind suppression for pypocketfft to resolve systematic failures that started to appear on 2020-05-27. (#3022) 2021-05-27 12:51:46 -07:00
Yichen
3ac690b88b
Explicitly export exception types. (#2999)
* Set visibility of exceptions to default.

Co-authored-by: XZiar <czktc2007@gmail.com>

* add test

* update docs

* Skip failed test.
2021-05-27 08:00:18 -07:00
Eric Cousineau
b6ec0e950c
functions: Add doc on incorrect argument index (#2979)
test_call_policies: Explicitly check free-functions and static methods
2021-05-06 10:13:30 -04:00
Pieter P
0c93a0f3fc
Fix Unicode support for ostream redirects (#2982)
* Crash when printing Unicode to redirected cout
Add failing tests

* Fix Unicode crashes redirected cout

* pythonbuf::utf8_remainder check end iterator

* Remove trailing whitespace and formatting iostream

* Avoid buffer overflow if ostream redirect races
This doesn't solve the actual race, but at least it now has a much lower
probability of reading past the end of the buffer even when data races
do occur.
2021-05-03 22:04:38 -07:00
Henry Schreiner
5e4804bb66
tests: use master commit for pytest on 3.10 (#2967) 2021-04-21 13:30:01 -04:00
Philipp Bucher
62976cfcb8
fix: using -Werror-all for Intel (#2948)
* correcting Werror for Intel

* adding ward for Intel

* adding wards for intel

* another ward for Intel

* missed one intel ward

* exact match for intel compiler

* removing inline limits

* disable warnings about inline limits

* formatter suggestion

* more indent

* hopefully make formatter happy

* addressed review

* fix &&

* Update tests/CMakeLists.txt

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
2021-04-14 14:01:27 -04:00
Tamaki Nishino
6709abba93
Allow function pointer extraction from overloaded functions (#2944)
* Add a failure test for overloaded functions

* Allow function pointer extraction from overloaded functions
2021-04-13 16:53:56 -07:00
Ralf W. Grosse-Kunstleve
ad6bf5cd39
Adding PyGILState_Check() in object_api<>::operator(). (#2919)
* Adding PyGILState_Check() in object_api<>::operator().

* Enabling PyGILState_Check() for Python >= 3.6 only.

Possibly, this explains why PyGILState_Check() cannot safely be used with Python 3.4 and 3.5:

https://github.com/python/cpython/pull/10267#issuecomment-434881587

* Adding simple micro benchmark.

* Reducing test time to minimum (purely for coverage, not for accurate results).

* Fixing silly oversight.

* Minor code organization improvement in test.

* Adding example runtimes.

* Removing capsys (just run with `-k test_callback_num_times -s` and using `.format()`.
2021-04-02 18:17:12 -07:00
Eric Cousineau
f676782bec
env: Add surrogate for pytest.deprecated_call for ptyest<3.9 (#2923)
env: Add surrogate for pytest.deprecated_call for ptyest<3.9
2021-04-02 14:34:09 -04:00
Robert Haschke
c2db53da56
fix: catch missing self argument in overloads constructor (#2914) 2021-04-02 13:13:44 -04:00
Ralf W. Grosse-Kunstleve
0e01c243c7
Generalizing suppression for pypocketfft. (#2896)
* Adding suppression for pypocketfft.

* Generalize existing pypocketfft Valgrind suppression

Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-03-09 15:07:44 -08:00
Boris Staletic
f110889dde
Use correct duration representation when casting from datetime.timdelta to std::chrono::duration (#2870)
* Use correct duration representation when casting from datetime.timdelta to std::chrono::duration

* When asserting datetime/timedelta/date/time we can equality-compare whole objects
2021-03-07 23:42:01 -08:00
Ralf W. Grosse-Kunstleve
44678e5476
Shuffling code in test_multiple_inheritance.cpp to separate struct/class definitions from bindings code. (#2890) 2021-03-05 17:45:57 -05:00
Ralf W. Grosse-Kunstleve
e2e819b2d8
Shuffling code in test_smart_ptr.cpp to separate struct/class definitions from bindings code. Back-porting from smart_holder branch, to minimize diffs and potential for merge conflicts. (#2875)
Thanks Wenzel!
2021-02-25 07:10:26 -08:00
Bertrand MICHEL
74a767d429
Dtype kind vs char (#2864)
* [dtype]: add type() method to access type attribute of PyArray_Descr (eq. to dtype.char in Python)

* [dtype] change type() name method to char_() to be compliant with Python numpy interface

* [dtype] fix by pre-commit

* [dtype] Change comments and solutions format for test

* Clarify documentation and move note about dtype.char vs PyArray_Descr::type to a plain, non-doxygen comment

* Fix and extend tests

* Fix the supposedly fixed tests

* Fix the fixed tests again

Co-authored-by: Bertrand MICHEL <bertrand.michel@onera.fr>
Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-02-23 10:57:28 +01:00
Dustin Spicuzza
c0fbb02c9f
Extract gil management functions to separate header (#2845) 2021-02-22 19:15:40 -08:00
Ralf W. Grosse-Kunstleve
0c42250a4e
Splitting out detail/type_caster_base.h from cast.h, with iwyu cleanup. (#2841)
* Splitting out detail/type_caster_base.h from cast.h.
* Include cleanup guided by include-what-you-use 0.12 based on clang version 9.0.1-11.
2021-02-22 18:38:18 -08:00
Vikram Pal
417067eeb8
Add pybind11::bytearray (#2799)
* Add initial implementation

* Add few more methods

* Add tests

* Fix a typo

* Use std::string constructor which takes size

* Fix implicit sign conversion error

* Add size method and test

* Remove implicit conversion

* Fix bytearray constructors and operator std::string()

* Make implicit bytearray constructor explicit

* Rerun tests

* Add null check

* Rerun tests

* Rerun tests - 2

* Remove NULL check
2021-02-14 15:51:13 +01:00
OnlineCop
cbae6d55c2
docs: fix CMake status for DOWNLOAD_EIGEN (#2857)
Co-authored-by: OnlineCop <onlinecop@gmail.com>
2021-02-12 17:11:23 -05:00
Yannick Jadoul
fe845878d1
Make sure all warnings in pytest get turned into errors (#2838)
* Make sure all warnings in pytest get turned into errors

* Suppress DeprecationWarnings in test_int_convert and test_numpy_int_convert

* PyLong_AsLong only shouts "Deprecated!" on Python>=3.8

* Fix remaining warnings on PyPy and CPython 3.10-dev
2021-02-01 14:52:20 +01:00
Henry Schreiner
721834b422
chore: get PyPy 3.7 wheels using NumPy 1.20 (#2837)
* chore: get PyPy 3.7 wheels using NumPy 1.20

* Add Valgrind suppressions after NumPy update

Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-01-31 17:29:09 -05:00
Yannick Jadoul
6cf6bf203e
Fix confusing weakref constructor overload (#2832)
* Demonstrate issue with weakref constructor overloads

* Fix weakref constructor to convert on being passed a non-weakref object

* Improve on nonlocal-scoped variable in test_weakref

* Keep backwards-compatibility by introducing PYBIND11_OBJECT_CVT_DEFAULT macro

* Simplify test_weakref
2021-01-31 23:13:31 +01:00
Ralf W. Grosse-Kunstleve
0432ae7c52
Changing pybind11::str to exclusively hold PyUnicodeObject (#2409)
* Changing pybind11::str to exclusively hold PyUnicodeObject
2021-01-29 09:41:42 -08:00
Henry Fredrick Schreiner
dff9b3b432 chore: add pytest-timeout, mypy 2021-01-26 20:59:27 -05:00
Yannick Jadoul
0bb8ca2639
Always call PyNumber_Index when casting from Python to a C++ integral type, also pre-3.8 (#2801)
* Always call PyNumber_Index when casting from Python to a C++ integral type, also pre-3.8

* Fixed on PyPy

* Simplify use of PyNumber_Index, following @rwgk's idea, and ignore warnings in >=3.8

* Reproduce mismatch between pre-3.8 and post-3.8 behavior on __index__ throwing TypeError

* Fix tests on 3.6 <= Python < 3.8

* No, I don't have an uninitialized variable

* Fix use of __index__ on Python 2

* Make types in test_int_convert more ~boring~ descriptive
2021-01-25 21:05:17 +01:00
crimsoncor
9ea39dc356
Force the builtin module key to be the correct type. (#2814)
* Force the builtin module key to be the correct type.

Previously it was always going to be a std::string which converted into
unicode. Python 2 appears to want module keys to be normal str types, so
this was breaking code that expected plain string types in the
builtins.keys() data structure

* Add a simple unit test to ensure all built-in keys are str

* Update the unit test so it will also run on pypy

* Run pre-commit.

Co-authored-by: Jesse Clemens <jesse.clemens@sony.com>
2021-01-24 09:17:28 -08:00
Henry Schreiner
130c99544d
fix: support basic dual includes (#2804) 2021-01-19 18:49:03 -05:00
Henry Schreiner
eb83feefff
style: avoid using unintialized variables (#2806)
* style: avoid using unintialized variables

Tested with cmake --warn-unintialized -S . -B build

* refactor: use function for possibly uninit vars
2021-01-19 18:48:22 -05:00
Michael Kuron
48534089f7
fix: Intel ICC C++17 compatibility (#2729)
* CI: Intel icc/icpc via oneAPI

Add testing for Intel icc/icpc via the oneAPI images.
Intel oneAPI is in a late beta stage, currently shipping
oneAPI beta09 with ICC 20.2.

CI: Skip Interpreter Tests for Intel

Cannot find how to add this, neiter the package `libc6-dev` nor
`intel-oneapi-mkl-devel` help when installed to solve this:
```
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - not found
CMake Error at /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:165 (message):
  Could NOT find Threads (missing: Threads_FOUND)
Call Stack (most recent call first):
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:458 (_FPHSA_FAILURE_MESSAGE)
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindThreads.cmake:234 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
  tests/test_embed/CMakeLists.txt:17 (find_package)
```

CI: libc6-dev from GCC for ICC

CI: Run bare metal for oneAPI

CI: Ubuntu 18.04 for oneAPI

CI: Intel +Catch -Eigen

CI: CMake from Apt (ICC tests)

CI: Replace Intel Py with GCC Py

CI: Intel w/o GCC's Eigen

CI: ICC with verbose make

[Debug] Find core dump

tests: use arg{} instead of arg() for Intel

tests: adding a few more missing {}

fix: sync with @tobiasleibner's branch

fix: try ubuntu 20-04

fix: drop exit 1

docs: Apply suggestions from code review

Co-authored-by: Tobias Leibner <tobias.leibner@googlemail.com>

Workaround for ICC enable_if issues

Another workaround for ICC's enable_if issues

fix error in previous commit

Disable one test for the Intel compiler in C++17 mode

Add back one instance of py::arg().noconvert()

Add NOLINT to fix clang-tidy check

Work around for ICC internal error in PYBIND11_EXPAND_SIDE_EFFECTS in C++17 mode

CI: Intel ICC with C++17

docs: pybind11/numpy.h does not require numpy at build time. (#2720)

This is nice enough to be mentioned explicitly in the docs.

docs: Update warning about Python 3.9.0 UB, now that 3.9.1 has been released (#2719)

Adjusting `type_caster<std::reference_wrapper<T>>` to support const/non-const propagation in `cast_op`. (#2705)

* Allow type_caster of std::reference_wrapper<T> to be the same as a native reference.

Before, both std::reference_wrapper<T> and std::reference_wrapper<const T> would
invoke cast_op<type>. This doesn't allow the type_caster<> specialization for T
to distinguish reference_wrapper types from value types.

After, the type_caster<> specialization invokes cast_op<type&>, which allows
reference_wrapper to behave in the same way as a native reference type.

* Add tests/examples for std::reference_wrapper<const T>

* Add tests which use mutable/immutable variants

This test is a chimera; it blends the pybind11 casters with a custom
pytype implementation that supports immutable and mutable calls.

In order to detect the immutable/mutable state, the cast_op needs
to propagate it, even through e.g. std::reference<const T>

Note: This is still a work in progress; some things are crashing,
which likely means that I have a refcounting bug or something else
missing.

* Add/finish tests that distinguish const& from &

Fixes the bugs in my custom python type implementation,
demonstrate test that requires const& and reference_wrapper<const T>
being treated differently from Non-const.

* Add passing a const to non-const method.

* Demonstrate non-const conversion of reference_wrapper in tests.

Apply formatting presubmit check.

* Fix build errors from presubmit checks.

* Try and fix a few more CI errors

* More CI fixes.

* More CI fixups.

* Try and get PyPy to work.

* Additional minor fixups. Getting close to CI green.

* More ci fixes?

* fix clang-tidy warnings from presubmit

* fix more clang-tidy warnings

* minor comment and consistency cleanups

* PyDECREF -> Py_DECREF

* copy/move constructors

* Resolve codereview comments

* more review comment fixes

* review comments: remove spurious &

* Make the test fail even when the static_assert is commented out.

This expands the test_freezable_type_caster a bit by:
1/ adding accessors .is_immutable and .addr to compare identity
from python.
2/ Changing the default cast_op of the type_caster<> specialization
to return a non-const value. In normal codepaths this is a reasonable
default.
3/ adding roundtrip variants to exercise the by reference, by pointer
and by reference_wrapper in all call paths.  In conjunction with 2/, this
demonstrates the failure case of the existing std::reference_wrpper conversion,
which now loses const in a similar way that happens when using the default cast_op_type<>.

* apply presubmit formatting

* Revert inclusion of test_freezable_type_caster

There's some concern that this test is a bit unwieldly because of the use
of the raw <Python.h> functions. Removing for now.

* Add a test that validates const references propagation.

This test verifies that cast_op may be used to correctly detect
const reference types when used with std::reference_wrapper.

* mend

* Review comments based changes.

1. std::add_lvalue_reference<type> -> type&
2. Simplify the test a little more; we're never returning the ConstRefCaster
type so the class_ definition can be removed.

* formatted files again.

* Move const_ref_caster test to builtin_casters

* Review comments: use cast_op and adjust some comments.

* Simplify ConstRefCasted test

I like this version better as it moves the assertion that matters
back into python.

ci: drop pypy2 linux, PGI 20.7, add Python 10 dev (#2724)

* ci: drop pypy2 linux, add Python 10 dev

* ci: fix mistake

* ci: commented-out PGI 20.11, drop 20.7

fix: regression with installed pybind11 overriding local one (#2716)

* fix: regression with installed pybind11 overriding discovered one

Closes #2709

* docs: wording incorrect

style: remove redundant instance->owned = true (#2723)

which was just before set to True in instance->allocate_layout()

fix: also throw in the move-constructor added by the PYBIND11_OBJECT macro, after the argument has been moved-out (if necessary) (#2701)

Make args_are_all_* ICC workarounds unconditional

Disable test_aligned on Intel ICC

Fix test_aligned on Intel ICC

Skip test_python_alreadyset_in_destructor on Intel ICC

Fix test_aligned again

ICC CI: Downgrade pytest

pytest 6 does not capture the `discard_as_unraisable` stderr and
just writes a warning with its content instead.

* refactor: simpler Intel workaround, suggested by @laramiel

* fix: try version with impl to see if it is easier to compile

* docs: update README for ICC

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-17 19:53:07 -05:00
Yannick Jadoul
8449a8089c
fix: only allow integer type_caster to call __int__ method when conversion is allowed; always call __index__ (#2698)
* Only allow integer type_caster to call __int__ or __index__ method when conversion is allowed

* Remove tests for __index__ as this seems to only be used to convert to int in 3.8+

* Take both `int` and `long` types into account for Python 2

* Add test_numpy_int_convert to assert tests currently fail, even though np.intc has an __index__ method

* Also consider __index__ as noconvert to a C++ integer

* New-style classes for Python 2.7; sigh

* Add some tests on types with custom __index__ method

* Ignore some tests in Python <3.8

* Update comment about conversion from np.float32 to C++ int

* Workaround difference between CPython and PyPy's different PyIndex_Check (unnoticed because we currently don't have PyPy >= 3.8)

* Avoid ICC segfault with py::arg()
2021-01-16 20:52:14 -05:00
Axel Huebl
0b3df7f964
ci: Intel icc/icpc via oneAPI (#2573)
* CI: Intel icc/icpc via oneAPI

Add testing for Intel icc/icpc via the oneAPI images.
Intel oneAPI is in a late beta stage, currently shipping
oneAPI beta09 with ICC 20.2.

* CI: Skip Interpreter Tests for Intel

Cannot find how to add this, neiter the package `libc6-dev` nor
`intel-oneapi-mkl-devel` help when installed to solve this:
```
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - not found
CMake Error at /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:165 (message):
  Could NOT find Threads (missing: Threads_FOUND)
Call Stack (most recent call first):
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:458 (_FPHSA_FAILURE_MESSAGE)
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindThreads.cmake:234 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
  tests/test_embed/CMakeLists.txt:17 (find_package)
```

* CI: libc6-dev from GCC for ICC

* CI: Run bare metal for oneAPI

* CI: Ubuntu 18.04 for oneAPI

* CI: Intel +Catch -Eigen

* CI: CMake from Apt (ICC tests)

* CI: Replace Intel Py with GCC Py

* CI: Intel w/o GCC's Eigen

* CI: ICC with verbose make

* [Debug] Find core dump

* tests: use arg{} instead of arg() for Intel

* tests: adding a few more missing {}

* fix: sync with @tobiasleibner's branch

* fix: try ubuntu 20-04

* fix: drop exit 1

* style: clang tidy fix

* style: fix missing NOLINT

* ICC: Update Compiler Name

Changed upstream with the last oneAPI release.

* ICC CI: Downgrade pytest

pytest 6 does not capture the `discard_as_unraisable` stderr and
just writes a warning with its content instead.

* Use new test pinning requirements.txt

* tests: add notes about intel, cleanup

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-15 15:59:47 -05:00
Yannick Jadoul
0f8d5f2eb6
Add a Valgrind build on debug Python 3.9 (#2746)
* Adding a valgrind build on debug Python 3.9

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Add Valgrind suppression files

- Introduce suppression file, populate it with a first suppression taken from CPython, and fix one leak in the tests
- Suppress leak in NumPy
- More clean tests!
- Tests with names a-e passing (except for test_buffer)
- Suppress multiprocessing errors
- Merge multiprocessing suppressions into other suppression files
- Numpy seems to be spelled with a big P
- Append single entry from valgrind-misc.supp to valgrind-python.supp, and make clear valgrind-python.supp is only CPython

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Enable test_virtual_functions with a workaround

* Add a memcheck cmake target

- Add a memcheck cmake target
- Reformat cmake
- Appease the formatting overlords - they are angry
- Format CMake valgrind target decently

* Update CI config to new action versions

* fix: separate memcheck from pytest

* ci: cleanup

* Merge Valgrind and other deadsnakes builds

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-15 21:07:31 +01:00
Yannick Jadoul
0855146357
Plug leaking function_records in cpp_function initialization in case of exceptions (found by Valgrind in #2746) (#2756)
* Plug leaking function_record objects when exceptions are thrown

* Plug leak of strdup'ed strings in function_record

* Some extra comments about the function_record ownership dance

* Clean up the function_record better, in case of exceptions

* Demonstrate some extra function_record leaks

* Change  DeleteStrings template argument to free_strings runtime argument in destruct(function_record *)

* Zero-state unique_function_record deleter object

* Clarify rvalue reference to unique_ptr parameter in initialize_generic

* Use push_back with const char * instead of emplace_back
2021-01-14 19:34:32 +01:00
Yannick Jadoul
98f1bbb800
Ignore deprecation warnings about old-style __init__/__setstate__ constructors in the tests (originally done in #2746) (#2759)
* Ignore old-style __init__ warnings

* Simplify ignoreOldStyleInitWarnings with py::exec

* Only wrap single class_::defs to ignore DeprecationWarnings about old-style __init__
2021-01-01 17:37:28 +01:00
Yannick Jadoul
e57dd4717e
Fix various minor memory leaks in the tests (found by Valgrind in #2746) (#2758)
* Fix leak in the test_copy_move::test_move_fallback

* Fix leaking PyMethodDef in test_class::test_implicit_conversion_life_support

* Plumb leak in test_buffer, occuring when a mutable buffer is requested for a read-only object, and enable test_buffer.py

* Fix weird return_value_policy::reference in test_stl_binders, and enable those tests

* Cleanup nodelete holder objects in test_smart_ptr, and enable those tests
2021-01-01 17:05:22 +01:00
Eric Cousineau
2110d2d8ba
enum: add missing Enum.value property (#2739)
* enum: Add Enum.value property

* simplify

* address review
2020-12-31 11:08:15 -05:00
Qifan Lu
d587a2fd17
fix: do not set docstring for function when empty (#2745)
* Do not set docstring for function when it's empty

* No need to check pointer for `free`

* Use ternary operator to conditionally set `ml_doc`
2020-12-27 22:56:30 -05:00
Yannick Jadoul
830f8eda87
tests: update pytest 6.2.1 and fix test_python_alreadyset_in_destructor (#2741)
* Update pytest to 6.2.1 in tests/requirements.txt

* Pin pytest to last supported version for 3.5

* Suppress PytestUnraisableExceptionWarning and use sys.__unraisablehook__ instead of sys.unraisablehook

* Fix filterwarnings mark on old pytest and old Python versions

* Cleanup ignore_pytest_unraisable_warning decorator
2020-12-24 09:53:23 -05:00
Ralf W. Grosse-Kunstleve
cecdfadc58
minor cleanup: fixing or silencing flake8 errors (#2731)
* minor cleanup: fixing or silencing flake8 errors

* ci: lock CMake to non-Universal version

* Update .github/workflows/ci.yml

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
2020-12-18 19:41:43 -05:00
Yannick Jadoul
30eb39ed79
fix: also throw in the move-constructor added by the PYBIND11_OBJECT macro, after the argument has been moved-out (if necessary) (#2701) 2020-12-15 23:22:53 -05:00
Laramie Leavitt
5469c238c8
Adjusting type_caster<std::reference_wrapper<T>> to support const/non-const propagation in cast_op. (#2705)
* Allow type_caster of std::reference_wrapper<T> to be the same as a native reference.

Before, both std::reference_wrapper<T> and std::reference_wrapper<const T> would
invoke cast_op<type>. This doesn't allow the type_caster<> specialization for T
to distinguish reference_wrapper types from value types.

After, the type_caster<> specialization invokes cast_op<type&>, which allows
reference_wrapper to behave in the same way as a native reference type.

* Add tests/examples for std::reference_wrapper<const T>

* Add tests which use mutable/immutable variants

This test is a chimera; it blends the pybind11 casters with a custom
pytype implementation that supports immutable and mutable calls.

In order to detect the immutable/mutable state, the cast_op needs
to propagate it, even through e.g. std::reference<const T>

Note: This is still a work in progress; some things are crashing,
which likely means that I have a refcounting bug or something else
missing.

* Add/finish tests that distinguish const& from &

Fixes the bugs in my custom python type implementation,
demonstrate test that requires const& and reference_wrapper<const T>
being treated differently from Non-const.

* Add passing a const to non-const method.

* Demonstrate non-const conversion of reference_wrapper in tests.

Apply formatting presubmit check.

* Fix build errors from presubmit checks.

* Try and fix a few more CI errors

* More CI fixes.

* More CI fixups.

* Try and get PyPy to work.

* Additional minor fixups. Getting close to CI green.

* More ci fixes?

* fix clang-tidy warnings from presubmit

* fix more clang-tidy warnings

* minor comment and consistency cleanups

* PyDECREF -> Py_DECREF

* copy/move constructors

* Resolve codereview comments

* more review comment fixes

* review comments: remove spurious &

* Make the test fail even when the static_assert is commented out.

This expands the test_freezable_type_caster a bit by:
1/ adding accessors .is_immutable and .addr to compare identity
from python.
2/ Changing the default cast_op of the type_caster<> specialization
to return a non-const value. In normal codepaths this is a reasonable
default.
3/ adding roundtrip variants to exercise the by reference, by pointer
and by reference_wrapper in all call paths.  In conjunction with 2/, this
demonstrates the failure case of the existing std::reference_wrpper conversion,
which now loses const in a similar way that happens when using the default cast_op_type<>.

* apply presubmit formatting

* Revert inclusion of test_freezable_type_caster

There's some concern that this test is a bit unwieldly because of the use
of the raw <Python.h> functions. Removing for now.

* Add a test that validates const references propagation.

This test verifies that cast_op may be used to correctly detect
const reference types when used with std::reference_wrapper.

* mend

* Review comments based changes.

1. std::add_lvalue_reference<type> -> type&
2. Simplify the test a little more; we're never returning the ConstRefCaster
type so the class_ definition can be removed.

* formatted files again.

* Move const_ref_caster test to builtin_casters

* Review comments: use cast_op and adjust some comments.

* Simplify ConstRefCasted test

I like this version better as it moves the assertion that matters
back into python.
2020-12-15 16:53:55 -08:00
nickbridgechess
2fa4747cd4
pythonbuf fix (#2675)
* Added test_thread testing for ostream_redirect segfault recreation

* fix: scoped_ostream_redirect str created outside gil

* Moved threading tests into test_iostream. Cleaned up some formatting. Deleted test_thread.{cpp,py}

* CI: few formatting fixes

* CI: yet another formatting fix

* CI: more formatting fixes. Removed unecessary comment

* Ignore 'warning C4702: unreachable code' in MSVC 2015

Co-authored-by: Nick Bridge <nick.bridge.chess@gmail.com>
Co-authored-by: Nick Bridge <nbridge@jumptrading.com>
Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2020-11-19 12:09:33 +01:00
Yannick Jadoul
c58758d049
fix: add reasonable argument names to enum_ methods (#2637)
* Add argument names to enum_ methods

* Add test_enum::test_docstring_signatures
2020-11-10 12:49:42 -05:00
Robert Haschke
b72cebeb22
style: clang-tidy: modernize-use-using (#2645)
* style: clang-tidy: modernize-use-using

* style: more clang-tidy checking

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2020-11-09 10:10:19 -08:00
Boris Staletic
06b673a0da
Allow NULL value in pybind11_meta_setattro (#2629) 2020-11-05 23:54:37 +01:00
Henry Schreiner
139c05dafa
ci: test on NumPy + Python 3.9 (#2628) 2020-10-29 09:56:00 -04:00
Ralf W. Grosse-Kunstleve
8290a5a0da
clang -Wnon-virtual-dtor compatibility (#2626)
* Adding missing virtual destructors, to silence clang -Wnon-virtual-dtor warnings.

Tested with clang version 9.0.1-12 under an Ubuntu-like OS.
Originally discovered in the Google-internal environment.

* adding -Wnon-virtual-dtor for GNU|Intel|Clang
2020-10-29 06:12:14 -07:00
Yannick Jadoul
3a37d33830
Add __builtins__ to globals argument of py::exec and py::eval if not present (#2616)
* Add __builtins__ to globals argument of `py::exec` and `py::eval` if not present

* Refactor into inline ensure_builtins_in_globals function
2020-10-27 19:58:27 +01:00