Commit Graph

209 Commits

Author SHA1 Message Date
Matthias Köppe
e0031bfceb include/pybind11/numpy.h: gcc 4.8.4 does not have is_trivially_copyable (#3270) 2021-09-15 14:01:24 -07:00
Ralf W. Grosse-Kunstleve
6abf2baa62
CodeHealth: Enabling clang-tidy google-explicit-constructor (#3250)
* Adding google-explicit-constructor to .clang-tidy

* clang-tidy explicit attr.h (all automatic)

* clang-tidy explicit cast.h (all automatic)

* clang-tidy detail/init.h (1 NOLINT)

* clang-tidy detail/type_caster_base.h (2 NOLINT)

* clang-tidy pybind11.h (7 NOLINT)

* clang-tidy detail/common.h (3 NOLINT)

* clang-tidy detail/descr.h (2 NOLINT)

* clang-tidy pytypes.h (23 NOLINT, only 1 explicit)

* clang-tidy eigen.h (7 NOLINT, 0 explicit)

* Adding 2 explicit in functional.h

* Adding 4 explicit in iostream.h

* clang-tidy numpy.h (1 NOLINT, 1 explicit)

* clang-tidy embed.h (0 NOLINT, 1 explicit)

* clang-tidy tests/local_bindings.h (0 NOLINT, 4 explicit)

* clang-tidy tests/pybind11_cross_module_tests.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/pybind11_tests.h (0 NOLINT, 2 explicit)

* clang-tidy tests/test_buffers.cpp (0 NOLINT, 2 explicit)

* clang-tidy tests/test_builtin_casters.cpp (0 NOLINT, 4 explicit)

* clang-tidy tests/test_class.cpp (0 NOLINT, 6 explicit)

* clang-tidy tests/test_copy_move.cpp (0 NOLINT, 7 explicit)

* clang-tidy tests/test_embed/external_module.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/test_embed/test_interpreter.cpp (0 NOLINT, 1 explicit)

* clang-tidy tests/object.h (0 NOLINT, 2 explicit)

* clang-tidy batch of fully automatic fixes.

* Workaround for MSVC 19.16.27045.0 C++17 Python 2 C++ syntax error.
2021-09-08 18:53:38 -07:00
Nick Cullen
503ff2a6fb
view for numpy arrays (#987)
* reshape

* more tests

* Update numpy.h

* Update test_numpy_array.py

* array view

* test

* Update test_numpy_array.cpp

* Update numpy.h

* Update numpy.h

* Update test_numpy_array.cpp

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix merge bug

* Make clang-tidy happy

* Add xfail for PyPy

* Fix casting issue

* Fix formatting

* Apply clang-tidy

* Address reviews on additional tests

* Fix ordering

* Do a little more reordering

* Fix typo

* Try improving tests

* Fix error in reshape

* Add one more reshape test

* Fix bugs and add test

* Relax test

* streamlining new tests; removing a few stray msg

* Fix style revert

* Fix clang-tidy

* Misc tweaks:
* Comment: matching style in file (///), responsibility sentence, consistent punctuation.
* Replacing `unsigned char` with `uint8_t` for max consistency.
* Removing `1` from `array_view1` because there is only one.

* Partial clang-format-diff.

Co-authored-by: ncullen93 <ncullen.th@dartmouth.edu>
Co-authored-by: NC Cullen <nicholas.c.cullen.th@dartmouth.edu>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ralf Grosse-Kunstleve <rwgk@google.com>
2021-08-26 14:11:01 -07:00
Nick Cullen
59ad1e7d05
reshape for numpy arrays (#984)
* reshape

* more tests

* Update numpy.h

* Update test_numpy_array.py

* Update numpy.h

* Update numpy.h

* Update test_numpy_array.cpp

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix merge bug

* Make clang-tidy happy

* Add xfail for PyPy

* Fix casting issue

* Address reviews on additional tests

* Fix ordering

* Do a little more reordering

* Fix typo

* Try improving tests

* Fix error in reshape

* Add one more reshape test

* streamlining new tests; removing a few stray msg

Co-authored-by: ncullen93 <ncullen.th@dartmouth.edu>
Co-authored-by: NC Cullen <nicholas.c.cullen.th@dartmouth.edu>
Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Ralf Grosse-Kunstleve <rwgk@google.com>
2021-08-26 08:12:35 -07:00
Ralf W. Grosse-Kunstleve
998d45e431
Cleanup of file-scoped and globally-scoped warning suppression pragmas across pybind11 header files. (#3201)
* Removing all MSVC C4127 warning suppression pragmas.

* Removing MSVC /WX (WERROR). To get a full list of all warnings.

* Inserting PYBIND11_SILENCE_MSVC_C4127. Changing one runtime if to #if.

* Changing PYBIND11_SILENCE_MSVC_C4127 macro to use absolute namespace (for use outside pybind11 include directory).

* Restoring MSVC /WX (WERROR).

* Removing globally-scoped suppression for clang -Wunsequenced. Based on an experiment under PR #3202 it is obsolete and can simply be removed.
2021-08-19 11:37:04 -07:00
Ralf W. Grosse-Kunstleve
4c7e509fa4
PYBIND11_NOINLINE-related cleanup. (#3179)
* Removing pragma for GCC -Wattributes, fixing forward declarations.

* Introducing PYBIND11_NOINLINE_FWD to deal with CUDA, GCC7, GCC8.

* Updating PYBIND11_NOINLINE_DCL in Doxyfile.

* Trying noinline, noinline for {CUDA, GCC7, GCC8}

* Trying noinline, inline for {CUDA, GCC7, GCC8}

* Adding GCC -Wattributes `pragma` in 3 header files.

* Introducing PYBIND11_NOINLINE_GCC_PRAGMA_ATTRIBUTES_NEEDED, used in 9 header files.

* Removing ICC pragma 2196, to see if it is still needed.

* Trying noinline, noinline for ICC

* Trying noinline, inline for ICC

* Restoring ICC pragma 2196, introducing PYBIND11_NOINLINE_FORCED, defined for testing.

* Removing code accidentally left in (was for experimentation only).

* Removing one-time-test define.

* Removing PYBIND11_NOINLINE_FWD macro (after learning that it makes no sense).

* Testing with PYBIND11_NOINLINE_DISABLED. Minor non-functional enhancements.

* Removing #define PYBIND11_NOINLINE_DISABLED (test was successful).

* Removing PYBIND11_NOINLINE_FORCED and enhancing comments for PYBIND11_NOINLINE.

* WIP stripping back

* Making -Wattributes pragma in pybind11 specific to GCC7, GCC8, CUDA.
2021-08-09 10:10:38 -07:00
Aaron Gokaslan
ff590c1258
maint(perf): Optimize Numpy constructor to remove copies by value. (#3183)
* maint(perf): Optimize Numpy Constructor with additional std::move

* Add more moves
2021-08-09 12:48:27 -04:00
Aaron Gokaslan
3893f37bce
maint(clang-tidy): Bugprone enable checks (#3166)
* Enable bugprone checks

* Reset delta and massage config

* Start to apply bugprone fixes

* try to fix minor bug

* Fix later

* Fix perfect forwarding bugprone

* Remove nolint

* undo constructor delete

* Fix bugprone-perfect-forwarding again

* Remove TODO

* Add another nolint for bugprone-exception-escape in scoped interpreter

* Fix remaining bugprone errors

* Properly apply bugprone-macro-parantheses

* Redo formatting and remove bugprone nolint

* Add coment and revert more whitespace changes

* Fix typo

* Fix parsing bug

* Add back comma

* Fix clang-tidy issue

* Apply remaining clang-tidy fixes
2021-08-06 14:30:28 -04:00
Aaron Gokaslan
9beaa925db
maint(clang-tidy): Improve code readability with explicit boolean casts (#3148)
* maint(clang-tidy) Improve code readability

* Fix minor typos

* Revert optimization that removed test case

* Fix comment formatting

* Revert another optimization to repro an issue

* Remove make_unique since it C++14 and newer only

* eformat comments

* Fix unsignedness of comparison

* Update comment
2021-07-27 15:32:26 -07:00
Aaron Gokaslan
b5357d1fa8
fix(clang-tidy): Enable clang-tidy else-after-return and redundant void checks (#3080)
* Enable clang-tidy else-after-return and redundant void checks

* Fix remaining else-after

* Address reviewer comments

* Fix indentation

* Rerun clang-tidy post merge
2021-07-09 06:45:53 -07:00
Aaron Gokaslan
3b30b0a51e
fix(clang-tidy): clang-tidy readability and misc fixes, like adding const (#3052)
* Enable and apply clang-tidy readability and misc fixes.

* Revert deprecated tester

* add space to tests/test_constants_and_functions.cpp
2021-06-21 10:37:48 -04:00
Aaron Gokaslan
af6218ff78
fix(clang-tidy): Apply performance fixes from clang-tidy (#3046)
* Apply performance fixes from clang-tidy

* 2nd Round of Perf Optimizations

* 3rd round of fixes & handle false-positive

* Apply missing fix and clang-format

* Apply reviewer comment
2021-06-19 10:53:27 -07:00
Jack S. Hale
4c7697dbe9
Add const T to docstring generation. (#3020)
* Add const T to docstring generation.

* Change order.

* See if existing test triggers for a const type.

* Add tests.

* Fix test.

* Remove experiment.

* Reformat.

* More tests, checks run.

* Adding `test_fmt_desc_` prefix to new test functions.

* Using pytest.mark.parametrize to 1. condense test; 2. exercise all functions even if one fails; 3. be less platform-specific (e.g. C++ float is not necessarily float32).

Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-06-08 11:56:45 -07:00
mvoelkle-cern
e08a58111d
Fix compilation with gcc < 5 (#2956)
When the user defines _GLIBCXX_USE_CXX11_ABI=0 to force the pre-c++11 ABI, numpy.h assumes that is_trivially_copyable is available.
It is not necessarily the case. This patch uses clang's feature detection instead.
The workaround is for certain libstdc++ versions, so the test should target these particular versions.
2021-04-19 13:53:57 -04:00
Bertrand MICHEL
74a767d429
Dtype kind vs char (#2864)
* [dtype]: add type() method to access type attribute of PyArray_Descr (eq. to dtype.char in Python)

* [dtype] change type() name method to char_() to be compliant with Python numpy interface

* [dtype] fix by pre-commit

* [dtype] Change comments and solutions format for test

* Clarify documentation and move note about dtype.char vs PyArray_Descr::type to a plain, non-doxygen comment

* Fix and extend tests

* Fix the supposedly fixed tests

* Fix the fixed tests again

Co-authored-by: Bertrand MICHEL <bertrand.michel@onera.fr>
Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-02-23 10:57:28 +01:00
Robert Haschke
b72cebeb22
style: clang-tidy: modernize-use-using (#2645)
* style: clang-tidy: modernize-use-using

* style: more clang-tidy checking

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2020-11-09 10:10:19 -08:00
Henry Schreiner
6bb71c48d5 fix: more intp asserts, reinterpret_cast 2020-10-15 17:38:49 -04:00
Henry Schreiner
b72c79f964 fix: std::is_pod -> pybind11::detail::is_pod 2020-10-15 17:38:49 -04:00
Fritz Reese
e8ad33bb30
Fix buffer_info for ctypes buffers (pybind#2502) (#2503)
* tests: New test for ctypes buffers (pybind#2502)

* fix: fix buffer_info segfault on views with no stride (pybind11#2502)

* Explicit conversions in buffer_info to make clang happy (pybind#2502)

* Another explicit cast in buffer_info constructor for clang (pybind#2502)

* Simpler implementation of buffer_info constructor from Py_buffer.

* Move test_ctypes_buffer into test_buffers

* Comment on why view->strides may be NULL (and fix some whitespace)

* Use c_strides() instead of zero when view->strides is NULL.

c_strides and f_strides are moved from numpy.h (py::array)
to buffer_info.h (py::detail) so they can be used from the
buffer_info Py_buffer constructor.

* Increase ctypes buffer test coverage in test_buffers.

* Split ctypes tests and skip one which is broken in PyPy2.
2020-10-03 23:09:14 +02:00
Henry Schreiner
6bcd220c8d
refactor: module -> module_ with typedef (#2544)
* WIP: module -> module_ without typedef

* refactor: allow py::module to work again
2020-10-03 13:38:03 -04:00
Yannick Jadoul
9796fe98fc
feat: vectorize functions with void return type (#1969)
* Allow function/functor passed to py::vectorize to return void

* Stealing @sizmailov's test and fixing unused argument warning

* Add missing std::move()

RVO doesn't work here because function return type is different from
actual returned type

* remove extra EOL

* docs: add a few details

* chore: pre-commit autoupdate

* Remove array_iterator, array_begin, and array_end (in detail namespace)

Co-authored-by: Sergei Izmailov <sergei.a.izmailov@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2020-10-02 15:30:34 -04:00
Yannick Jadoul
56784c4f42
Add unchecked_reference::operator() and operator[] to overload resolution of unchecked_mutable_reference (#2514) 2020-10-02 19:07:04 +02:00
Boris Staletic
d3c999c774
fix: rename pybind11::module to pybind11::module_ (#2489)
Support C++20. For backwards compatibility, we provide an alias for the old name.
This change is necessary to easily avoid errors when a compiler thinks
`module` is used as a keyword.
2020-09-16 17:15:42 -04:00
Henry Schreiner
ce88e940ce style: clang-tidy: modernize-use-auto 2020-09-15 09:56:59 -04:00
Henry Schreiner
b342c37388 style: clang-tidy: modernize-use-using 2020-09-15 09:56:59 -04:00
Yannick Jadoul
9df13835c8
Stop py::array_t arguments from accepting arrays that do not match the C- or F-contiguity flags (#2484)
* Stop py::array_t arguments from accepting arrays that do not match the C- or F-contiguity flags

* Add trivially-contiguous arrays to the tests
2020-09-15 14:50:51 +02:00
Henry Schreiner
621906b3e7
fix: support nvcc and test (#2461)
* fix: support nvcc and test

* fixup! fix: support nvcc and test

* docs: mention what compilers fail

* fix: much simpler logic

* refactor: slightly faster / clearer
2020-09-10 11:49:26 -04:00
Henry Schreiner
2e2de8c87a
fix: add missing signature (#2363)
* fix: add missing signature

* fix: add to array_t too
2020-08-13 20:13:16 -04:00
Henry Schreiner
4470671796 fix: too many braces on clang 3.6 2020-07-26 09:25:27 -04:00
Boris Staletic
aa982e131d
Small fixes in numpy.h (#2293)
- `PyArray_NewFromDescr_` should have been using `Py_intptr_t const *`
  - 18a6e3e505/numpy/core/src/multiarray/ctors.h (L5-L8)
- `PyArray_GetArrayParamsFromObject_` should be using `NPY_BOOL`
  - 18a6e3e505/numpy/core/src/multiarray/ctors.c (L1350-L1355)
  - https://docs.scipy.org/doc/numpy-1.13.0/reference/c-api.dtype.html#c.npy_bool
- `PyArray_DescrNewFromType` is at offset 96
  - 36e017194c/numpy/core/code_generators/numpy_api.py (L141)
- `array_t` constructor that takes a size and a pointer should take `ssize_t`.
  - Fixes #1599
2020-07-12 16:45:13 +02:00
Yannick Jadoul
f980d76d38
Change NAMESPACE_* macros into PYBIND11_NAMESPACE_* (#2283)
* Change NAMESPACE_BEGIN and NAMESPACE_END macros into PYBIND11_NAMESPACE_BEGIN and PYBIND11_NAMESPACE_END

* Fix sudden HomeBrew 'python not installed' error

* Sweep difference in 'Class.__init__() must be called when overriding __init__' error message between CPython and PyPy under the rug

* Homebrew updated to 3.8 yesterday.

Co-authored-by: Henry Schreiner <HenrySchreinerIII@gmail.com>
2020-07-08 18:14:41 -04:00
Sergei Izmailov
90d99b56a0 Render pybind11::array as numpy.ndarray in docstrings 2020-06-10 13:36:31 +02:00
Sergei Izmailov
22b2504080 Render full numpy numeric names (e.g. numpy.int32) 2020-06-10 13:36:31 +02:00
peter
03f9e4a8ec Fix compilation with clang-cl 2020-04-26 09:47:34 +02:00
Wenzel Jakob
a60648223d Revert "numpy.h: minor preprocessor fix suggested by @chaekwan"
This reverts commit 61e4f11823.
2019-11-28 08:07:32 +01:00
Wenzel Jakob
61e4f11823 numpy.h: minor preprocessor fix suggested by @chaekwan 2019-11-28 07:42:34 +01:00
Wenzel Jakob
7f5dad7d5f Remove usage of C++14 constructs (fixes #1929) 2019-09-21 19:03:14 +02:00
Pauli Virtanen
c9d32a81f4 numpy: fix refcount leak to dtype singleton (#1860)
PyArray_DescrFromType returns a new reference, not borrowed one
2019-07-27 11:35:32 +02:00
Eric Cousineau
4a3464fd88 numpy: Provide concrete size aliases
Test for dtype checks now succeed without warnings
2019-07-23 13:17:20 +02:00
Igor Socec
a301c5add8 Dtype field ordering for NumPy 1.14 (#1837)
* Test dtype field order in numpy dtype tests

When running tests with NumPy 1.14 or later this test exposes the
"invalid buffer descriptor" error reported in #1274.

* Create dtype_ptr with ordered fields
2019-07-15 13:31:03 +02:00
Henry Schreiner
9bb3313162 Fixing warnings about conversions in GCC 7+ (#1753) 2019-04-07 10:38:10 +02:00
Henry Schreiner
ae951ca085 CI fixes (#1744)
* Fix warning that not including a cmake source or build dir will be a fatal error (it is now on newest CMakes)
    * Fixes appveyor
* Travis uses CMake 3.9 for more than a year now
* Travis dropped sudo: false in December
* Dropping Sphinx 2
- clang7: Suppress self-assign warnings; fix missing virtual dtors
- pypy:
  - Keep old version (newer stuff breaks)
  - Pin packages to extra index for speed
- travis:
  - Make docker explicit; remove docker if not needed
  - Make commands more verbose (for debugging / repro)
  - Make Ubuntu dist explicit per job
- Fix Windows
- Add names to travis
2019-04-06 19:09:39 +02:00
Boris Staletic
0ca6867e8e Avoid Visual Studio 2017 15.9.4 ICE 2019-01-03 12:05:01 +01:00
Matthias Geier
7bb1da969a fix copy-paste error: non-const -> const 2018-08-28 23:23:13 +02:00
Naotoshi Seo
5ef1af138d Fix SEGV to create empty shaped numpy array (#1371)
Fix a segfault when creating a 0-dimension, c-strides array.
2018-05-06 10:59:25 -03:00
Jason Rhinelander
add56ccdca MSVC workaround for broken using detail::_ warning 2018-01-12 12:37:54 -04:00
Ivan Smirnov
d1db2ccfdf Make register_dtype() accept any field containers (#1225)
* Make register_dtype() accept any field containers

* Add a test for programmatic dtype registration
2017-12-27 11:00:27 -04:00
Jason Rhinelander
c6a57c10d1 Fix dtype string leak
`PyArray_DescrConverter_` doesn't steal a reference to the argument,
and so the passed arguments shouldn't be `.release()`d.
2017-09-19 23:16:45 -03:00
Dean Moldovan
56613945ae Use semi-constexpr signatures on MSVC
MSCV does not allow `&typeid(T)` in constexpr contexts, but the string
part of the type signature can still be constexpr. In order to avoid
`typeid` as long as possible, `descr` is modified to collect type
information as template parameters instead of constexpr `typeid`.
The actual `std::type_info` pointers are only collected in the end,
as a `constexpr` (gcc/clang) or regular (MSVC) function call.

Not only does it significantly reduce binary size on MSVC, gcc/clang
benefit a little bit as well, since they can skip some intermediate
`std::type_info*` arrays.
2017-09-16 12:02:49 +02:00
Dean Moldovan
c10ac6cf1f Make it possible to generate constexpr signatures in C++11 mode
The current C++14 constexpr signatures don't require relaxed constexpr,
but only `auto` return type deduction. To get around this in C++11,
the type caster's `name()` static member functions are turned into
`static constexpr auto` variables.
2017-09-16 12:02:49 +02:00