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00126859a5
* Add option for enable/disable enum members in docstring * Add tests for disable enum members docstring option * Add docstring options to documentation * style: pre-commit fixes * Fix typos in documentation * Improve documentation wording * Apply suggestions by @Skylion007 Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
373 lines
14 KiB
ReStructuredText
373 lines
14 KiB
ReStructuredText
Miscellaneous
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#############
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.. _macro_notes:
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General notes regarding convenience macros
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==========================================
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pybind11 provides a few convenience macros such as
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:func:`PYBIND11_DECLARE_HOLDER_TYPE` and ``PYBIND11_OVERRIDE_*``. Since these
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are "just" macros that are evaluated in the preprocessor (which has no concept
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of types), they *will* get confused by commas in a template argument; for
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example, consider:
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.. code-block:: cpp
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PYBIND11_OVERRIDE(MyReturnType<T1, T2>, Class<T3, T4>, func)
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The limitation of the C preprocessor interprets this as five arguments (with new
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arguments beginning after each comma) rather than three. To get around this,
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there are two alternatives: you can use a type alias, or you can wrap the type
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using the ``PYBIND11_TYPE`` macro:
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.. code-block:: cpp
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// Version 1: using a type alias
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using ReturnType = MyReturnType<T1, T2>;
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using ClassType = Class<T3, T4>;
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PYBIND11_OVERRIDE(ReturnType, ClassType, func);
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// Version 2: using the PYBIND11_TYPE macro:
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PYBIND11_OVERRIDE(PYBIND11_TYPE(MyReturnType<T1, T2>),
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PYBIND11_TYPE(Class<T3, T4>), func)
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The ``PYBIND11_MAKE_OPAQUE`` macro does *not* require the above workarounds.
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.. _gil:
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Global Interpreter Lock (GIL)
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=============================
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The Python C API dictates that the Global Interpreter Lock (GIL) must always
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be held by the current thread to safely access Python objects. As a result,
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when Python calls into C++ via pybind11 the GIL must be held, and pybind11
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will never implicitly release the GIL.
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.. code-block:: cpp
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void my_function() {
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/* GIL is held when this function is called from Python */
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}
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PYBIND11_MODULE(example, m) {
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m.def("my_function", &my_function);
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}
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pybind11 will ensure that the GIL is held when it knows that it is calling
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Python code. For example, if a Python callback is passed to C++ code via
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``std::function``, when C++ code calls the function the built-in wrapper
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will acquire the GIL before calling the Python callback. Similarly, the
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``PYBIND11_OVERRIDE`` family of macros will acquire the GIL before calling
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back into Python.
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When writing C++ code that is called from other C++ code, if that code accesses
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Python state, it must explicitly acquire and release the GIL.
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The classes :class:`gil_scoped_release` and :class:`gil_scoped_acquire` can be
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used to acquire and release the global interpreter lock in the body of a C++
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function call. In this way, long-running C++ code can be parallelized using
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multiple Python threads, **but great care must be taken** when any
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:class:`gil_scoped_release` appear: if there is any way that the C++ code
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can access Python objects, :class:`gil_scoped_acquire` should be used to
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reacquire the GIL. Taking :ref:`overriding_virtuals` as an example, this
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could be realized as follows (important changes highlighted):
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.. code-block:: cpp
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:emphasize-lines: 8,30,31
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class PyAnimal : public Animal {
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public:
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/* Inherit the constructors */
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using Animal::Animal;
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/* Trampoline (need one for each virtual function) */
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std::string go(int n_times) {
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/* PYBIND11_OVERRIDE_PURE will acquire the GIL before accessing Python state */
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PYBIND11_OVERRIDE_PURE(
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std::string, /* Return type */
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Animal, /* Parent class */
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go, /* Name of function */
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n_times /* Argument(s) */
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);
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}
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};
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PYBIND11_MODULE(example, m) {
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py::class_<Animal, PyAnimal> animal(m, "Animal");
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animal
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.def(py::init<>())
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.def("go", &Animal::go);
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py::class_<Dog>(m, "Dog", animal)
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.def(py::init<>());
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m.def("call_go", [](Animal *animal) -> std::string {
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// GIL is held when called from Python code. Release GIL before
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// calling into (potentially long-running) C++ code
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py::gil_scoped_release release;
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return call_go(animal);
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});
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}
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The ``call_go`` wrapper can also be simplified using the ``call_guard`` policy
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(see :ref:`call_policies`) which yields the same result:
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.. code-block:: cpp
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m.def("call_go", &call_go, py::call_guard<py::gil_scoped_release>());
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Binding sequence data types, iterators, the slicing protocol, etc.
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==================================================================
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Please refer to the supplemental example for details.
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.. seealso::
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The file :file:`tests/test_sequences_and_iterators.cpp` contains a
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complete example that shows how to bind a sequence data type, including
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length queries (``__len__``), iterators (``__iter__``), the slicing
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protocol and other kinds of useful operations.
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Partitioning code over multiple extension modules
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=================================================
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It's straightforward to split binding code over multiple extension modules,
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while referencing types that are declared elsewhere. Everything "just" works
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without any special precautions. One exception to this rule occurs when
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extending a type declared in another extension module. Recall the basic example
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from Section :ref:`inheritance`.
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.. code-block:: cpp
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py::class_<Pet> pet(m, "Pet");
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pet.def(py::init<const std::string &>())
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.def_readwrite("name", &Pet::name);
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py::class_<Dog>(m, "Dog", pet /* <- specify parent */)
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.def(py::init<const std::string &>())
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.def("bark", &Dog::bark);
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Suppose now that ``Pet`` bindings are defined in a module named ``basic``,
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whereas the ``Dog`` bindings are defined somewhere else. The challenge is of
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course that the variable ``pet`` is not available anymore though it is needed
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to indicate the inheritance relationship to the constructor of ``class_<Dog>``.
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However, it can be acquired as follows:
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.. code-block:: cpp
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py::object pet = (py::object) py::module_::import("basic").attr("Pet");
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py::class_<Dog>(m, "Dog", pet)
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.def(py::init<const std::string &>())
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.def("bark", &Dog::bark);
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Alternatively, you can specify the base class as a template parameter option to
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``class_``, which performs an automated lookup of the corresponding Python
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type. Like the above code, however, this also requires invoking the ``import``
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function once to ensure that the pybind11 binding code of the module ``basic``
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has been executed:
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.. code-block:: cpp
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py::module_::import("basic");
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py::class_<Dog, Pet>(m, "Dog")
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.def(py::init<const std::string &>())
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.def("bark", &Dog::bark);
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Naturally, both methods will fail when there are cyclic dependencies.
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Note that pybind11 code compiled with hidden-by-default symbol visibility (e.g.
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via the command line flag ``-fvisibility=hidden`` on GCC/Clang), which is
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required for proper pybind11 functionality, can interfere with the ability to
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access types defined in another extension module. Working around this requires
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manually exporting types that are accessed by multiple extension modules;
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pybind11 provides a macro to do just this:
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.. code-block:: cpp
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class PYBIND11_EXPORT Dog : public Animal {
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...
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};
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Note also that it is possible (although would rarely be required) to share arbitrary
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C++ objects between extension modules at runtime. Internal library data is shared
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between modules using capsule machinery [#f6]_ which can be also utilized for
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storing, modifying and accessing user-defined data. Note that an extension module
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will "see" other extensions' data if and only if they were built with the same
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pybind11 version. Consider the following example:
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.. code-block:: cpp
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auto data = reinterpret_cast<MyData *>(py::get_shared_data("mydata"));
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if (!data)
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data = static_cast<MyData *>(py::set_shared_data("mydata", new MyData(42)));
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If the above snippet was used in several separately compiled extension modules,
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the first one to be imported would create a ``MyData`` instance and associate
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a ``"mydata"`` key with a pointer to it. Extensions that are imported later
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would be then able to access the data behind the same pointer.
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.. [#f6] https://docs.python.org/3/extending/extending.html#using-capsules
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Module Destructors
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==================
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pybind11 does not provide an explicit mechanism to invoke cleanup code at
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module destruction time. In rare cases where such functionality is required, it
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is possible to emulate it using Python capsules or weak references with a
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destruction callback.
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.. code-block:: cpp
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auto cleanup_callback = []() {
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// perform cleanup here -- this function is called with the GIL held
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};
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m.add_object("_cleanup", py::capsule(cleanup_callback));
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This approach has the potential downside that instances of classes exposed
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within the module may still be alive when the cleanup callback is invoked
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(whether this is acceptable will generally depend on the application).
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Alternatively, the capsule may also be stashed within a type object, which
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ensures that it not called before all instances of that type have been
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collected:
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.. code-block:: cpp
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auto cleanup_callback = []() { /* ... */ };
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m.attr("BaseClass").attr("_cleanup") = py::capsule(cleanup_callback);
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Both approaches also expose a potentially dangerous ``_cleanup`` attribute in
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Python, which may be undesirable from an API standpoint (a premature explicit
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call from Python might lead to undefined behavior). Yet another approach that
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avoids this issue involves weak reference with a cleanup callback:
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.. code-block:: cpp
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// Register a callback function that is invoked when the BaseClass object is collected
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py::cpp_function cleanup_callback(
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[](py::handle weakref) {
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// perform cleanup here -- this function is called with the GIL held
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weakref.dec_ref(); // release weak reference
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}
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);
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// Create a weak reference with a cleanup callback and initially leak it
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(void) py::weakref(m.attr("BaseClass"), cleanup_callback).release();
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.. note::
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PyPy does not garbage collect objects when the interpreter exits. An alternative
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approach (which also works on CPython) is to use the :py:mod:`atexit` module [#f7]_,
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for example:
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.. code-block:: cpp
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auto atexit = py::module_::import("atexit");
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atexit.attr("register")(py::cpp_function([]() {
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// perform cleanup here -- this function is called with the GIL held
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}));
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.. [#f7] https://docs.python.org/3/library/atexit.html
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Generating documentation using Sphinx
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=====================================
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Sphinx [#f4]_ has the ability to inspect the signatures and documentation
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strings in pybind11-based extension modules to automatically generate beautiful
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documentation in a variety formats. The python_example repository [#f5]_ contains a
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simple example repository which uses this approach.
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There are two potential gotchas when using this approach: first, make sure that
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the resulting strings do not contain any :kbd:`TAB` characters, which break the
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docstring parsing routines. You may want to use C++11 raw string literals,
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which are convenient for multi-line comments. Conveniently, any excess
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indentation will be automatically be removed by Sphinx. However, for this to
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work, it is important that all lines are indented consistently, i.e.:
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.. code-block:: cpp
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// ok
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m.def("foo", &foo, R"mydelimiter(
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The foo function
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Parameters
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----------
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)mydelimiter");
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// *not ok*
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m.def("foo", &foo, R"mydelimiter(The foo function
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Parameters
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----------
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)mydelimiter");
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By default, pybind11 automatically generates and prepends a signature to the docstring of a function
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registered with ``module_::def()`` and ``class_::def()``. Sometimes this
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behavior is not desirable, because you want to provide your own signature or remove
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the docstring completely to exclude the function from the Sphinx documentation.
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The class ``options`` allows you to selectively suppress auto-generated signatures:
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.. code-block:: cpp
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PYBIND11_MODULE(example, m) {
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py::options options;
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options.disable_function_signatures();
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m.def("add", [](int a, int b) { return a + b; }, "A function which adds two numbers");
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}
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pybind11 also appends all members of an enum to the resulting enum docstring.
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This default behavior can be disabled by using the ``disable_enum_members_docstring()``
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function of the ``options`` class.
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With ``disable_user_defined_docstrings()`` all user defined docstrings of
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``module_::def()``, ``class_::def()`` and ``enum_()`` are disabled, but the
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function signatures and enum members are included in the docstring, unless they
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are disabled separately.
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Note that changes to the settings affect only function bindings created during the
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lifetime of the ``options`` instance. When it goes out of scope at the end of the module's init function,
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the default settings are restored to prevent unwanted side effects.
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.. [#f4] http://www.sphinx-doc.org
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.. [#f5] http://github.com/pybind/python_example
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.. _avoiding-cpp-types-in-docstrings:
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Avoiding C++ types in docstrings
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================================
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Docstrings are generated at the time of the declaration, e.g. when ``.def(...)`` is called.
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At this point parameter and return types should be known to pybind11.
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If a custom type is not exposed yet through a ``py::class_`` constructor or a custom type caster,
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its C++ type name will be used instead to generate the signature in the docstring:
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.. code-block:: text
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| __init__(...)
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| __init__(self: example.Foo, arg0: ns::Bar) -> None
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^^^^^^^
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This limitation can be circumvented by ensuring that C++ classes are registered with pybind11
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before they are used as a parameter or return type of a function:
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.. code-block:: cpp
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PYBIND11_MODULE(example, m) {
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auto pyFoo = py::class_<ns::Foo>(m, "Foo");
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auto pyBar = py::class_<ns::Bar>(m, "Bar");
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pyFoo.def(py::init<const ns::Bar&>());
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pyBar.def(py::init<const ns::Foo&>());
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}
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