Commit Graph

580 Commits

Author SHA1 Message Date
Ralf W. Grosse-Kunstleve
55fcade987 Merge branch 'master' into sh_merge_master 2021-09-24 12:13:34 -07:00
Jeremy Maitin-Shepard
62c4909cce
Add custom_type_setup attribute (#3287)
* Fix `pybind11::object::operator=` to be safe if `*this` is accessible from Python

* Add `custom_type_setup` attribute

This allows for custom modifications to the PyHeapTypeObject prior to
calling `PyType_Ready`.  This may be used, for example, to define
`tp_traverse` and `tp_clear` functions.
2021-09-24 12:08:22 -07:00
Henry Schreiner
21282e645a
feat: reapply fixed version of #3271 (#3293)
* Add make_value_iterator (#3271)

* Add make_value_iterator

This is the counterpart to make_key_iterator, and will allow
implementing a `value` method in `bind_map` (although doing so is left
for a subsequent PR).

I made a few design changes to reduce copy-and-paste boilerplate.
Previously detail::iterator_state had a boolean template parameter to
indicate whether it was being used for make_iterator or
make_key_iterator. I replaced the boolean with a class that determines
how to dereference the iterator. This allows for a generic
implementation of `__next__`.

I also added the ValueType and Extra... parameters to the iterator_state
template args, because I think it was a bug that they were missing: if
make_iterator is called twice with different values of these, only the
first set has effect (because the state class is only registered once).
There is still a potential issue in that the *values* of the extra
arguments are latched on the first call, but since most policies are
empty classes this should be even less common.

* Add some remove_cv_t to appease clang-tidy

* Make iterator_access and friends take reference

For some reason I'd accidentally made it take a const value, which
caused some issues with third-party packages.

* Another attempt to remove remove_cv_t from iterators

Some of the return types were const (non-reference) types because of the
pecularities of decltype: `decltype((*it).first)` is the *declared* type
of the member of the pair, rather than the type of the expression. So if
the reference type of the iterator is `pair<const int, int> &`, then the
decltype is `const int`. Wrapping an extra set of parentheses to form
`decltype(((*it).first))` would instead give `const int &`.

This means that the existing make_key_iterator actually returns by value
from `__next__`, rather than by reference. Since for mapping types, keys
are always const, this probably hasn't been noticed, but it will affect
make_value_iterator if the Python code tries to mutate the returned
objects. I've changed things to use double parentheses so that
make_iterator, make_key_iterator and make_value_iterator should now all
return the reference type of the iterator. I'll still need to add a test
for that; for now I'm just checking whether I can keep Clang-Tidy happy.

* Add back some NOLINTNEXTLINE to appease Clang-Tidy

This is favoured over using remove_cv_t because in some cases a const
value return type is deliberate (particularly for Eigen).

* Add a unit test for iterator referencing

Ensure that make_iterator, make_key_iterator and make_value_iterator
return references to the container elements, rather than copies. The
test for make_key_iterator fails to compile on master, which gives me
confidence that this branch has fixed it.

* Make the iterator_access etc operator() const

I'm actually a little surprised it compiled at all given that the
operator() is called on a temporary, but I don't claim to fully
understand all the different value types in C++11.

* Attempt to work around compiler bugs

https://godbolt.org/ shows an example where ICC gets the wrong result
for a decltype used as the default for a template argument, and CI also
showed problems with PGI. This is a shot in the dark to see if it fixes
things.

* Make a test constructor explicit (Clang-Tidy)

* Fix unit test on GCC 4.8.5

It seems to require the arguments to the std::pair constructor to be
implicitly convertible to the types in the pair, rather than just
requiring is_constructible.

* Remove DOXYGEN_SHOULD_SKIP_THIS guards

Now that a complex decltype expression has been replaced by a simpler
nested type, I'm hoping Doxygen will be able to build it without issues.

* Add comment to explain iterator_state template params

* fix: regression in #3271

Co-authored-by: Bruce Merry <1963944+bmerry@users.noreply.github.com>
2021-09-23 15:06:07 -04:00
Ralf W. Grosse-Kunstleve
c13817d775 Merge branch 'master' into sh_merge_master 2021-09-23 08:56:16 -07:00
Henry Schreiner
2fa3fcfda5 Revert "Add make_value_iterator (#3271)"
This reverts commit ee0c5ee405.
2021-09-22 23:10:03 -04:00
Aaron Gokaslan
0fb981b219
Add blacken-docs and pycln pre-commit hooks (#3292)
* Apply blacken-docs and fix language-hints

* Add blacken-docs pre-commit hook

* Add pycln pre-commit hook

* Enable a few builtin hooks

* Black no longer ignores pyi files
2021-09-22 15:38:50 -04:00
Ralf W. Grosse-Kunstleve
87624157cf Merge branch 'master' into smart_holder 2021-09-21 12:50:59 -07:00
Bruce Merry
ee0c5ee405
Add make_value_iterator (#3271)
* Add make_value_iterator

This is the counterpart to make_key_iterator, and will allow
implementing a `value` method in `bind_map` (although doing so is left
for a subsequent PR).

I made a few design changes to reduce copy-and-paste boilerplate.
Previously detail::iterator_state had a boolean template parameter to
indicate whether it was being used for make_iterator or
make_key_iterator. I replaced the boolean with a class that determines
how to dereference the iterator. This allows for a generic
implementation of `__next__`.

I also added the ValueType and Extra... parameters to the iterator_state
template args, because I think it was a bug that they were missing: if
make_iterator is called twice with different values of these, only the
first set has effect (because the state class is only registered once).
There is still a potential issue in that the *values* of the extra
arguments are latched on the first call, but since most policies are
empty classes this should be even less common.

* Add some remove_cv_t to appease clang-tidy

* Make iterator_access and friends take reference

For some reason I'd accidentally made it take a const value, which
caused some issues with third-party packages.

* Another attempt to remove remove_cv_t from iterators

Some of the return types were const (non-reference) types because of the
pecularities of decltype: `decltype((*it).first)` is the *declared* type
of the member of the pair, rather than the type of the expression. So if
the reference type of the iterator is `pair<const int, int> &`, then the
decltype is `const int`. Wrapping an extra set of parentheses to form
`decltype(((*it).first))` would instead give `const int &`.

This means that the existing make_key_iterator actually returns by value
from `__next__`, rather than by reference. Since for mapping types, keys
are always const, this probably hasn't been noticed, but it will affect
make_value_iterator if the Python code tries to mutate the returned
objects. I've changed things to use double parentheses so that
make_iterator, make_key_iterator and make_value_iterator should now all
return the reference type of the iterator. I'll still need to add a test
for that; for now I'm just checking whether I can keep Clang-Tidy happy.

* Add back some NOLINTNEXTLINE to appease Clang-Tidy

This is favoured over using remove_cv_t because in some cases a const
value return type is deliberate (particularly for Eigen).

* Add a unit test for iterator referencing

Ensure that make_iterator, make_key_iterator and make_value_iterator
return references to the container elements, rather than copies. The
test for make_key_iterator fails to compile on master, which gives me
confidence that this branch has fixed it.

* Make the iterator_access etc operator() const

I'm actually a little surprised it compiled at all given that the
operator() is called on a temporary, but I don't claim to fully
understand all the different value types in C++11.

* Attempt to work around compiler bugs

https://godbolt.org/ shows an example where ICC gets the wrong result
for a decltype used as the default for a template argument, and CI also
showed problems with PGI. This is a shot in the dark to see if it fixes
things.

* Make a test constructor explicit (Clang-Tidy)

* Fix unit test on GCC 4.8.5

It seems to require the arguments to the std::pair constructor to be
implicitly convertible to the types in the pair, rather than just
requiring is_constructible.

* Remove DOXYGEN_SHOULD_SKIP_THIS guards

Now that a complex decltype expression has been replaced by a simpler
nested type, I'm hoping Doxygen will be able to build it without issues.

* Add comment to explain iterator_state template params
2021-09-21 13:37:19 -04:00
Ralf W. Grosse-Kunstleve
03d409b4a0 Merge branch 'master' into sh_merge_master 2021-09-20 05:57:17 -07:00
Henry Schreiner
04dd3262f0
docs: update CHANGELOG (#3276) 2021-09-17 17:28:26 -04:00
Ralf W. Grosse-Kunstleve
94a5c673bc Merge branch 'master' into sh_merge_master 2021-09-08 18:56:35 -07:00
Thomas Ballinger
39a0aac88e
docs fix to avoid nonexistent SmartCompile (#3241) 2021-09-08 14:00:00 -04:00
Ralf W. Grosse-Kunstleve
a655f95a83 Merge branch 'master' into sh_merge_master 2021-08-26 14:46:44 -07:00
Jouke Witteveen
031a700dfd
Add make_simple_namespace function and tests (#2840)
Co-authored-by: Jouke Witteveen <j.witteveen@cosine.nl>
2021-08-26 08:04:22 -07:00
Ralf W. Grosse-Kunstleve
c8ce4b8df8
Clone of @virtuald's PR #2112 with minor enhancements. (#3215)
* Add py::raise_from to enable chaining exceptions on Python 3.3+

* Use 'raise from' in initialization

* Documenting the exact base version of _PyErr_FormatVFromCause, adding back `assert`s.

Co-authored-by: Dustin Spicuzza <dustin@virtualroadside.com>
2021-08-23 17:30:01 -07:00
Ralf W. Grosse-Kunstleve
8865d28317 Automatic part of merging branch 'master' into sh_merge_master.
The only manual intervention was to remove the merge conflict markers in pybind11.h.

TODO in separate commit: complete removal of the obsolete detail/pragma_warning_block.h.
2021-08-14 07:54:40 -07:00
Aaron Gokaslan
9df2f1ff13
maint(precommit): Apply isort (#3195)
* Apply isort

* Tweak isort config

* Add env.py as a known_first_party

* Add one missing known first party

* Make config compat with older isort versions

* Add another comment

* Revert pyproject setting
2021-08-13 12:37:05 -04:00
Henry Schreiner
a2b78a8c27
chore: changelog update (#3163)
* chore: changelog update

* Update docs/changelog.rst
2021-08-03 13:16:14 -04:00
Ralf W. Grosse-Kunstleve
7cc433ca7f Merge branch 'master' into smart_holder 2021-07-21 06:56:03 -07:00
jesse-sony
d65edfb024
Feature/local exception translator (#2650)
* Create a module_internals struct

Since we now have two things that are going to be module local, it felt
correct to add a struct to manage them.

* Add local exception translators

These are added via the  register_local_exception_translator function
and are then applied before the global translators

* Add unit tests to show the local exception translator works

* Fix a bug in the unit test with the string value of KeyError

* Fix a formatting issue

* Rename registered_local_types_cpp()

Rename it to get_registered_local_types_cpp() to disambiguate from the
new member of module_internals

* Add additional comments to new local exception code path

* Add a register_local_exception function

* Add additional unit tests for register_local_exception

* Use get_local_internals like get_internals

* Update documentation for new local exception feature

* Add back a missing space

* Clean-up some issues in the docs

* Remove the code duplication when translating exceptions

Separated out the exception processing into a standalone function in the
details namespace.

Clean-up some comments as per PR notes as well

* Remove the code duplication in register_exception

* Cleanup some formatting things caught by clang-format

* Remove the templates from exception translators

But I added a using declaration to alias the type.

* Remove the extra local from local_internals variable names

* Add an extra explanatory comment to local_internals

* Fix a typo in the code
2021-07-21 05:22:18 -07:00
Ralf W. Grosse-Kunstleve
a1918dd6d9 Merge branch 'master' into smart_holder 2021-07-17 10:32:03 -07:00
Henry Schreiner
74935f8d67
chore: post-release (#3128) 2021-07-17 11:50:42 -04:00
Ralf W. Grosse-Kunstleve
02dc01b536 Merge branch 'master' into smart_holder 2021-07-16 08:14:43 -07:00
Henry Schreiner
65e95ea867
chore: bump to 2.7.0 (#3123) 2021-07-16 09:27:47 -04:00
Ralf W. Grosse-Kunstleve
5548f24b37 Merge branch 'master' into smart_holder 2021-07-15 20:43:55 -07:00
Henry Schreiner
6642f389dc
docs: update changelog (#3122) 2021-07-15 20:00:07 -04:00
Ralf W. Grosse-Kunstleve
1f04229733 Merge branch 'master' into smart_holder 2021-07-15 15:05:40 -07:00
Axel Huebl
55f6f6e9bf
Fix: RTD Docutils Build (#3119)
The docutils 0.17+ release uses more semantic HTML5 tags, which
the RTD theme does not (yet) know.

This breaks side bar, lists and other elements.
2021-07-15 15:41:36 -04:00
Henry Schreiner
31843d455d
docs: reduce visibility of 3.9.0 warning (#3105) 2021-07-15 15:01:13 -04:00
Ralf W. Grosse-Kunstleve
88546fff7d Fixing merge conflict. 2021-07-15 06:23:06 -07:00
Henry Schreiner
cd061aeef1
style: pre-commit cleanup (#3111)
* style: disallow PyTest (should be pytest)

* style: cleanup spell checking a bit

* style: add a few items to the .gitignore
2021-07-14 16:49:13 -04:00
Ralf W. Grosse-Kunstleve
279c93654e Merge branch 'master' into smart_holder 2021-07-13 21:24:02 -07:00
Antony Lee
1be0a0a610
Add helper to build in-tree extensions. (#2831)
For single-file extensions, a convenient pattern offered by cython
is to place the source files directly in the python source tree
(`foo/__init__.py`, `foo/ext.pyx`), deriving the package names from
their filesystem location.  Adapt this pattern for pybind11, using an
`intree_extensions` helper, which should be thought of as the moral
equivalent to `cythonize`.

Differences with cythonize: I chose not to include globbing support
(`intree_extensions(glob.glob("**/*.cpp"))` seems sufficient), nor to
provide extension-customization kwargs (directly setting the attributes
on the resulting Pybind11Extension objects seems sufficient).

We could choose to have `intree_extension` (singular instead) and make
users write `[*map(intree_extension, glob.glob("**/*.cpp"))]`; no strong
opinion here.

Co-authored-by: Aaron Gokaslan <skylion.aaron@gmail.com>
2021-07-13 17:21:55 -04:00
Ralf W. Grosse-Kunstleve
88cc350075 Merge branch 'master' into smart_holder 2021-07-13 05:57:50 -07:00
Henry Schreiner
6a644c8f04
docs: update changelog (#3099)
* docs: update changelog

* docs: add one more and merge tidy
2021-07-13 00:08:29 -04:00
Ralf W. Grosse-Kunstleve
678538f097 Merge branch 'master' into smart_holder 2021-07-12 16:59:58 -07:00
Ralf W. Grosse-Kunstleve
75090647ce
More precise return_value_policy::automatic documentation. (#2920)
* Adding test_return_vector_bool_raw_ptr to test_stl.py.

* First attempt to make the documentation more accurate, but not trying to be comprehensive, to not bloat the reference table with too many details.

* Fixing minor oversights.

* Applying reviewer suggestion.
2021-07-12 16:56:10 -07:00
Ralf W. Grosse-Kunstleve
932a4cf409 Merge branch 'master' into smart_holder 2021-07-12 14:07:26 -07:00
Henry Schreiner
f0a65c899c
docs(fix): spelling mistake in recent commit 2021-07-12 16:57:28 -04:00
Ralf W. Grosse-Kunstleve
7472d37a93
Adding iostream.h thread-safety documentation. (#2995)
* Adding iostream.h thread-safety documentation.

* Restoring `TestThread` code with added `std::lock_guard<std::mutex>`.

* Updating new comments to reflect new information.

* Fixing up `git rebase -X theirs` accidents.
2021-07-12 13:39:06 -07:00
Ralf W. Grosse-Kunstleve
9cd8e7449b Merge branch 'master' into smart_holder 2021-07-10 16:39:02 -07:00
Jan Iwaszkiewicz
cf006af2f0
Fix typos and docs style (#3088)
* py::pickle typo

* correct dots and parentheses
2021-07-10 11:16:07 -07:00
Ralf W. Grosse-Kunstleve
704daac879 Merge branch 'master' into smart_holder 2021-07-06 14:12:08 -07:00
luzpaz
8bee61b645
docs: fix various typos (#3075)
Found via `codespell -q 3 -L nd,ot,thist`
2021-07-04 19:58:35 -04:00
Ralf W. Grosse-Kunstleve
84cbec0bc1 Merge branch 'master' into smart_holder 2021-07-02 07:07:49 -07:00
Antony Lee
5bcaaa0423
Add a std::filesystem::path <-> os.PathLike caster. (#2730) 2021-07-02 07:00:50 -07:00
Ralf W. Grosse-Kunstleve
c48f887cd8 Merge branch 'master' into smart_holder 2021-06-17 14:01:07 -07:00
Aaron Gokaslan
b4b67f026b
Fix typos (#3044) 2021-06-17 13:39:59 -07:00
Aaron Gokaslan
cd4b49a2c8
Update py::kwargs examples to pass by reference (#3038) 2021-06-17 13:20:17 -07:00
Ralf W. Grosse-Kunstleve
2cfc017e2d Merge branch 'master' into smart_holder 2021-05-27 11:30:03 -07:00