Commit Graph

2916 Commits

Author SHA1 Message Date
Ralf W. Grosse-Kunstleve
01e0045547
Enabling use of smart_holder for types with non-public destructors. (#2878)
* Enabling use of smart_holder for types with non-public destructors.

* Resolving clang-tidy error (GitHub CI).
2021-02-26 17:51:50 -08:00
Ralf W. Grosse-Kunstleve
fb69079e3c Merge branch 'master' into smart_holder 2021-02-25 07:29:33 -08:00
Tom de Geus
9c0aa69937
Pointing out namespace in docs (#2874) 2021-02-25 07:25:50 -08:00
Ralf W. Grosse-Kunstleve
f37483c3d9 Fixing merge conflict. 2021-02-25 07:20:06 -08:00
Ralf W. Grosse-Kunstleve
e2e819b2d8
Shuffling code in test_smart_ptr.cpp to separate struct/class definitions from bindings code. Back-porting from smart_holder branch, to minimize diffs and potential for merge conflicts. (#2875)
Thanks Wenzel!
2021-02-25 07:10:26 -08:00
Ralf W. Grosse-Kunstleve
d9c13f1771 Transferring additional comments from PR #2875. 2021-02-24 11:41:15 -08:00
Ralf W. Grosse-Kunstleve
1bafd5db5f
Adding py::smart_holder (for smart-pointer interoperability). (#2672)
* Adding test_unique_ptr_member (for desired PyCLIF behavior).

See also: https://github.com/pybind/pybind11/issues/2583

Does not build with upstream master or
https://github.com/pybind/pybind11/pull/2047, but builds with
https://github.com/RobotLocomotion/pybind11 and almost runs:

```
Running tests in directory "/usr/local/google/home/rwgk/forked/EricCousineau-TRI/pybind11/tests":
================================================================================= test session starts =================================================================================
platform linux -- Python 3.8.5, pytest-5.4.3, py-1.9.0, pluggy-0.13.1
rootdir: /usr/local/google/home/rwgk/forked/EricCousineau-TRI/pybind11/tests, inifile: pytest.ini
collected 2 items

test_unique_ptr_member.py .F                                                                                                                                                    [100%]

====================================================================================== FAILURES =======================================================================================
_____________________________________________________________________________ test_pointee_and_ptr_owner ______________________________________________________________________________

    def test_pointee_and_ptr_owner():
        obj = m.pointee()
        assert obj.get_int() == 213
        m.ptr_owner(obj)
        with pytest.raises(ValueError) as exc_info:
>           obj.get_int()
E           Failed: DID NOT RAISE <class 'ValueError'>

test_unique_ptr_member.py:17: Failed
============================================================================= 1 failed, 1 passed in 0.06s =============================================================================
```

* unique_ptr or shared_ptr return

* new test_variant_unique_shared with vptr_holder prototype

* moving prototype code to pybind11/vptr_holder.h, adding type_caster specialization to make the bindings involving unique_ptr passing compile, but load and cast implementations are missing

* disabling GitHub Actions on pull_request (for this PR)

* disabling AppVeyor (for this PR)

* TRIGGER_SEGSEV macro, annotations for GET_STACK (vptr::get), GET_INT_STACK (pointee)

* adding test_promotion_of_disowned_to_shared

* Copying tests as-is from xxx_value_ptr_xxx_holder branch.

https://github.com/rwgk/pybind11/tree/xxx_value_ptr_xxx_holder

Systematically exercising returning and passing unique_ptr<T>, shared_ptr<T>
with unique_ptr, shared_ptr holder.

Observations:

test_holder_unique_ptr:
  make_unique_pointee  OK
  pass_unique_pointee  BUILD_FAIL (as documented)
  make_shared_pointee  Abort free(): double free detected
  pass_shared_pointee  RuntimeError: Unable to load a custom holder type from a default-holder instance

test_holder_shared_ptr:
  make_unique_pointee  Segmentation fault (#1138)
  pass_unique_pointee  BUILD_FAIL (as documented)
  make_shared_pointee  OK
  pass_shared_pointee  OK

* Copying tests as-is from xxx_value_ptr_xxx_holder branch.

https://github.com/rwgk/pybind11/tree/xxx_value_ptr_xxx_holder

Systematically exercising casting between shared_ptr<base>, shared_ptr<derived>.

* Demonstration of Undefined Behavior in handling of shared_ptr holder.

Based on https://godbolt.org/z/4fdjaW by jorgbrown@ (thanks Jorg!).

* Additional demonstration of Undefined Behavior in handling of shared_ptr holder.

* fixing up-down mixup in comment

* Demonstration of Undefined Behavior in handling of polymorphic pointers.

(This demo does NOT involve smart pointers at all, unlike the otherwise similar test_smart_ptr_private_first_base.)

* minor test_private_first_base.cpp simplification (after discovering that this can be wrapped with Boost.Python, using boost::noncopyable)

* pybind11 equivalent of Boost.Python test similar to reproducer under #1333

* Snapshot of WIP, TODO: shared_ptr deleter with on/off switch

* Adding vptr_deleter.

* Adding from/as unique_ptr<T> and unique_ptr<T, D>.

* Adding from_shared_ptr. Some polishing.

* New tests/core/smart_holder_poc_test.cpp, using Catch2.

* Adding in vptr_deleter_guard_flag.

* Improved labeling of TEST_CASEs.

* Shuffling existing TEST_CASEs into systematic matrix.

* Implementing all [S]uccess tests.

* Implementing all [E]xception tests.

* Testing of exceptions not covered by the from-as matrix.

* Adding top-level comment.

* Converting from methods to factory functions (no functional change).

* Removing obsolete and very incomplete test (replaced by Catch2-based test).

* Removing stray file.

* Adding type_caster_bare_interface_demo.

* Adding shared_ptr<mpty>, shared_ptr<mpty const> casters.

* Adding unique_ptr<mpty>, unique_ptr<mpty const> casters.

* Pure copy of `class class_` implementation in pybind11.h (master commit 98f1bbb800).

* classh.h: renaming of class_ to classh + namespace; forking test_classh_wip from test_type_caster_bare_interface_demo.

* Hard-coding smart_holder into classh.

* Adding mpty::mtxt string member.

* Adding isinstance<mpty> in type_caster::load functions.

* Adding rvalue_ref, renaming const_value_ref to lvalue_ref & removing const.

* Retrieving smart_holder pointer in type_caster<mpty>::load, and using it cast_op operators.

* Factoring out smart_holder_type_caster_load.

* Retrieving smart_holder pointer in type_caster<std::shared_ptr<mpty[ const]>>::load, and using it cast_op operators.

* Improved error messaging: Cannot disown nullptr (as_unique_ptr).

* Retrieving smart_holder pointer in type_caster<std::unique_ptr<mpty[ const]>>::load, and using it cast_op operators.

* Pure `clang-format --style=file -i` change.

* Pure `clang-format --style=file -i` change, with two `clang-format off` directives.

* Fixing oversight (discovered by flake8).

* flake8 cleanup

* Systematically setting mtxt for all rtrn_mpty_* functions (preparation, the values are not actually used yet).

* static cast handle for rtrn_cptr works by simply dropping in code from type_caster_base (marked with comments).

* static cast handle for rtrn_cref works by simply dropping in code from type_caster_base (marked with comments). rtrn_mref and rtrn_mptr work via const_cast (to add const).

* static cast handle for rtrn_valu works by simply dropping in code from type_caster_base (marked with comments). rtrn_rref raises a RuntimeError, to be investigated.

* Copying type_caster_generic::cast into type_caster<mpty> as-is (preparation for handling smart pointers).

* Pure clang-format change (applied to original type_caster_generic::cast).

* Adding comment re potential use_count data race.

* static handle cast implementations for rtrn_shmp, rtrn_shcp.

* Adding MISSING comments in operator std::unique_ptr<mpty[ const]>.

* static handle cast implementations for rtrn_uqmp, rtrn_uqcp.

* Bug fix: vptr_deleter_armed_flag_ptr has to live on the heap.

See new bullet point in comment section near the top.

The variable was also renamed to reflect its function more accurately.

* Fixing bugs discovered by ASAN. The code is now ASAN, MSAN, UBSAN clean.

* Making test_type_caster_bare_interface_demo.cpp slightly more realistic, ASAN, MSAN, UBSAN clean.

* Calling deregister_instance after disowning via unique_ptr.

* Removing enable_shared_from_this stub, simplifying existing code, clang-format.

Open question, with respect to the original code:
76a160070b/include/pybind11/pybind11.h (L1510)
To me it looks like the exact situation marked as `std::shared_ptr<Good> gp1 = not_so_good.getptr();` here: https://en.cppreference.com/w/cpp/memory/enable_shared_from_this
The comment there is: `// undefined behavior (until C++17) and std::bad_weak_ptr thrown (since C++17)`
Does the existing code have UB pre C++17?

I'll leave handling of enable_shared_from_this for later, as the need arises.

* Cosmetical change around helper functions.

* Using type_caster_base<mpty>::src_and_type directly, removing copy. Also renaming one cast to cast_const_raw_ptr, for clarity.

* Fixing clang-format oversight.

* Using factored-out make_constructor (PR #2798), removing duplicate code.

* Inserting additional assert to ensure a returned unique_ptr is always a new Python instance.

* Adding minor comment (change to internals needed to distinguish uninitialized/disowned in error message).

* Factoring out find_existing_python_instance().

* Moving factored-out make_constructor to test_classh_wip.cpp, restoring previous version of cast.h. This is currently the most practical approach. See PR #2798 for background.

* Copying classh type_casters from test_classh_wip.cpp UNMODIFIED, as a baseline for generalizing the code.

* Using pybind11/detail/classh_type_casters.h from test_classh_wip.cpp.

* Adding & using PYBIND11_CLASSH_TYPE_CASTERS define.

* Adding test_classh_inheritance, currently failing (passes with class_).

* Removing .clang-format before git rebase master (where the file was added).

* Bringing back .clang-format, the previous rm was a bad idea.

* Folding in modified_type_caster_generic_load_impl, just enough to pass test_class_wip. test_classh_inheritance is still failing, but with a different error: [RuntimeError: Incompatible type (as_raw_ptr_unowned).]

* Minimal changes needed to pass test_classh_inheritance.

* First pass adjusting try_implicit_casts and try_load_foreign_module_local to capture loaded_v_h, but untested and guarded with pybind11_failure("Untested"). This was done mainly to determine general feasibility. Note the TODO in pybind11.h, where type_caster_generic::local_load is currently hard-coded. test_classh_wip and test_classh_inheritance still pass, as before.

* Decoupling generic_type from type_caster_generic.

* Changes and tests covering classh_type_casters try_implicit_casts.

* Minimal test covering classh_type_casters load_impl Case 2b.

* Removing stray isinstance<T>(src): it interferes with the py::module_local feature. Adding missing #includes.

* Tests for classh py::module_local() feature.

* Pure renaming of function names in test_classh_inheritance, similar to the systematic approach used in test_class_wip. NO functional changes.

* Pure renaming of function and variable names, for better generalization when convoluting with inheritance. NO functional changes.

* Adopting systematic naming scheme from test_classh_wip. NO functional changes.

* Moving const after type name, for functions that cover a systematic scheme. NO functional changes.

* Adding smart_holder_type_caster_load::loaded_as_shared_ptr, currently bypassing smart_holder shared_ptr tracking completely, but the tests pass and are sanitizer clean.

* Removing rtti_held from smart_holder. See updated comment.

* Cleaning up loaded_as_raw_ptr_unowned, loaded_as_shared_ptr.

* Factoring out convert_type and folding into loaded_as_unique_ptr.

* Folding convert_type into lvalue_ref and rvalue_ref paths. Some smart_holder_type_caster_load cleanup.

* Using unique_ptr in local_load to replace static variable. Also adding local_load_safety_guard.

* Converting test_unique_ptr_member to using classh: fully working, ASAN, MSAN, UBSAN clean.

* Removing debugging comments (GET_STACK, GET_INT_STACK). cast.h is identical to current master again, pybind11.h only has the generic_type::initialize(..., &type_caster_generic::local_load) change.

* Purging obsolete pybind11/vptr_holder.h and associated test.

* Moving several tests to github.com/rwgk/rwgk_tbx/tree/main/pybind11_tests

a2c2f88174

These tests are from experimenting, and for demonstrating UB in pybind11 multiple inheritance handling ("first_base"), to be fixed later.

* Adding py::smart_holder support to py::class_, purging py::classh completely.

* Renaming files in include directory, creating pybind11/smart_holder.h.

* Renaming all "classh" to "smart_holder" in pybind11/detail/smart_holder_type_casters.h.

The user-facing macro is now PYBIND11_SMART_HOLDER_TYPE_CASTERS.

* Systematically renaming tests to use "class_sh" in the name.

* Renaming test_type_caster_bare_interface_demo to test_type_caster_bare_interface.

* Renaming new tests/core subdirectory to tests/pure_cpp.

* Adding new tests to CMake config, resetting CI config.

* Changing CMake file so that test_class_sh_module_local.py actually runs.

* clang-tidy fixes.

* 32-bit compatibility.

* Reusing type_caster_base make_copy_constructor, make_move_constructor with a trick.

* CMake COMPARE NATURAL is not available with older versions.

* Adding copyright notices to new header files.

* Explicitly define copy/move constructors/assignments.

* Adding new header files to tests/extra_python_package/test_files.py.

* Adding tests/pure_cpp/CMakeLists.txt.

* Making use of the new find_existing_python_instance() function factored out with PR #2822.

* Moving define PYBIND11_SMART_HOLDER_TYPE_CASTERS(T) down in the file. NO functional changes. Preparation for follow-up work (to keep that diff smaller).

* Reintroducing py::classh, this time as a simple alias for py::class_<U, py::smart_holder>.

* Replacing detail::is_smart_holder<H> in cast.h with detail::is_smart_holder_type_caster<T>.
Moving get_local_load_function_ptr, init_instance_for_type to smart_holder_type_caster_class_hooks.
Expanding static_assert in py::type::handle_of<> to accommodate smart_holder_type_casters.

* Fixing oversight.

* Adding classu alias for class_<U, std::unique_ptr<U>>.

* Giving up on idea to use legacy init_instance only if is_base_of<type_caster_generic, type_caster<T>. There are use cases in the wild that define both a custom type_caster and class_.

* Removing test_type_caster_bare_interface, which was moved to the separate PR #2834.

* Moving up is_smart_holder_type_caster, to also use in cast_is_temporary_value_reference.

* Adding smart_holder_type_casters for unique_ptr with custom deleter. SEVERE CODE DUPLICATION. This commit is to establish a baseline for consolidating the unique_ptr code.

* Unification of unique_ptr, unique_ptr_with_deleter code in smart_holder_poc.h. Leads to more fitting error messages. Enables use of unique_ptr<T, D> smart_holder_type_casters also for unique_ptr<T>.

* Copying files as-is from branch test_unique_ptr_member (PR #2672).

* Adding comment, simplifying naming, cmake addition.

* Introducing PYBIND11_USE_SMART_HOLDER_AS_DEFAULT macro (tested only undefined; there are many errors with the macro defined).

* Removing test_type_caster_bare_interface, which was moved to the separate PR #2834.

* Fixing oversight introduced with commit 95425f13d6.

* Setting record.default_holder correctly for PYBIND11_USE_SMART_HOLDER_AS_DEFAULT.

With this test_class.cpp builds and even mostly runs, except
`test_multiple_instances_with_same_pointer`, which segfaults because it is
using a `unique_ptr` holder but `smart_holder` `type_caster`.

Also adding `static_assert`s to generate build errors for such situations,
but guarding with `#if 0` to first pivot to test_factory_constructors.cpp.

* Fixing up cast.h and smart_holder.h after rebase.

* Removing detail/smart_holder_type_casters.h in separate commit.

* Commenting out const in def_buffer(... const). With this, test_buffers builds and runs with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT. Explanation why the const needs to be removed, or fix elsewhere, is still needed, but left for later.

* Adding test_class_sh_factory_constructors, reproducing test_factory_constructors failure. Using py::class_ in this commit, to be changed to py::classh for debugging.

* Removing include/pybind11/detail/smart_holder_type_casters.h from CMakeLists.txt, test_files.py (since it does not exist in this branch).

* Adding // DANGER ZONE reminders.

* Converting as many py::class_ to py::classh as possible, not breaking tests.

* Adding initimpl::construct() overloads, resulting in test_class_sh_factory_constructors feature parity for py::class_ and py::classh.

* Adding enable_if !is_smart_holder_type_caster to existing initimpl::construct(). With this test_factory_constructors.cpp builds with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT.

* Disabling shared_ptr&, shared_ptr* tests when building with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT for now, pending work on smart_holder_type_caster<shared_ptr>.

* Factoring out struct and class definitions into anonymous namespace. Preparation for building with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT.

* Simplifying from_unique_ptr(): typename D = std::default_delete<T> is not needed. Factoring out is_std_default_delete<T>() for consistentcy between ensure_compatible_rtti_uqp_del() and from_unique_ptr().

* Introducing PYBIND11_SMART_POINTER_HOLDER_TYPE_CASTERS. Using it in test_smart_ptr.cpp. With this test_smart_ptr builds with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT and all but one test run successfully.

* Introducing 1. type_caster_for_class_, used in PYBIND11_MAKE_OPAQUE, and 2. default_holder_type, used in stl_bind.h.

* Using __VA_ARGS__ in PYBIND11_SMART_POINTER_HOLDER_TYPE_CASTERS.

* Replacing condense_for_macro with much simpler approach.

* Softening static_assert, to only check specifically that smart_holder is not mixed with type_caster_base, and unique_ptr/shared_ptr holders are not mixed with smart_holder_type_casters.

* Adding PYBIND11_SMART_POINTER_HOLDER_TYPE_CASTERS in test_class.cpp (with this all but one test succeed with PYBIND11_USE_SMART_HOLDER_AS_DEFAULT).

* Adding remaining PYBIND11_SMART_POINTER_HOLDER_TYPE_CASTERS. static_assert for "necessary conditions" for both types of default holder, static_assert for "strict conditions" guarded by new PYBIND11_STRICT_ASSERTS_CLASS_HOLDER_VS_TYPE_CASTER_MIX. All tests build & run as before with unique_ptr as the default holder, all tests build for smart_holder as the default holder, even with the strict static_assert.

* Introducing check_is_smart_holder_type_caster() function for runtime check, and reinterpreting record.default_holder as "uses_unique_ptr_holder". With this test_smart_ptr succeeds. (All 42 tests build, 35 tests succeed, 5 run but have some failures, 2 segfault.)

* Bug fix: Adding have_value() to smart_holder_type_caster_load. With this test_builtin_casters succeeds. (All 42 tests build, 36 tests succeed, 5 run but have some failures, 1 segfault.)

* Adding unowned_void_ptr_from_direct_conversion to modified_type_caster_generic_load_impl. This fixes the last remaining segfault (test_numpy_dtypes). New stats for all tests combined: 12 failed, 458 passed.

* Adding "Lazy allocation for unallocated values" (for old-style __init__) into load_value_and_holder. Deferring destruction of disowned holder until clear_instance, to remain inspectable for "uninitialized" or "disowned" detection. New stats for all tests combined: 5 failed, 465 passed.

* Changing std::shared_ptr pointer/reference to const pointer/reference. New stats for all tests combined: 4 failed, 466 passed.

* Adding return_value_policy::move to permissible policies for unique_ptr returns. New stats for all tests combined: 3 failed, 467 passed.

* Overlooked flake8 fixes.

* Manipulating failing ConstructorStats test to pass, to be able to run all tests with ASAN.

This version of the code is ASAN clean with unique_ptr or smart_holder as the default.

This change needs to be reverted after adopting the existing move-only-if-refcount-is-1
logic used by type_caster_base.

* Adding copy constructor and move constructor tracking to atyp. Preparation for a follow-up change in smart_holder_type_caster, to make this test sensitive to the changing behavior.

[skip ci]

* Removing `operator T&&() &&` from smart_holder_type_caster, for compatibility with the behavior of type_caster_base. Enables reverting 2 of 3 test manipulations applied under commit 249df7cbdb. The manipulation in test_factory_constructors.py is NOT reverted in this commit.

[skip ci]

* Fixing unfortunate editing mishap. This reverts the last remaining test manipulation in commit 249df7cbdb and makes all existing unit tests pass with smart_holder as default holder.

* GitHub CI clang-tidy fixes.

* Adding messages to terse `static_assert`s, for pre-C++17 compatibility.

* Using @pytest.mark.parametrize to run each assert separately (to see all errors, not just the first).

* Systematically removing _atyp from function names, to make the test code simpler.

* Using re.match to accommodate variable number of intermediate MvCtor.

* Also removing `operator T()` from smart_holder_type_caster, to fix gcc compilation errors. The only loss is pass_rref in test_class_sh_basic.

* Systematically replacing `detail::enable_if_t<...smart_holder...>` with `typename std::enable_if<...smart_holder...>::type`. Attempt to work around MSVC 2015 issues, to be tested via GitHub CI. The idea for this change originates from this comment: https://github.com/pybind/pybind11/issues/1616#issuecomment-444536813

* Importing re before pytest after observing a PyPy CI flake when importing pytest first.

* Copying MSVC 2015 compatibility change from branch pr2672_use_smart_holder_as_default.

* Introducing is_smart_holder_type_caster_base_tag, to keep smart_holder code more disconnected.

* Working around MSVC 2015 bug.

* Expanding comment for MSVC 2015 workaround.

* Systematically changing std::enable_if back to detail::enable_if_t, effectively reverting commit 5d4b6890a3.

* Removing unused smart_holder_type_caster_load::loaded_as_rvalue_ref (it was an oversight that it was not removed with commit 23036a45eb).

* Removing py::classu, because it does not seem useful enough.

* Reverting commit 6349531306 by un-commenting `const` in `def_buffer(...)`. To make this possible, `operator T const&` and `operator T const*` in `smart_holder_type_caster` need to be marked as `const` member functions.

* Adding construct() overloads for constructing smart_holder from alias unique_ptr, shared_ptr returns.

* Adding test_class_sh_factory_constructors.cpp to tests/CMakeLists.txt (fixes oversight, this should have been added long before).

* Compatibility with old clang versions (clang 3.6, 3.7 C++11).

* Cleaning up changes to existing unit tests.

* Systematically adding SMART_HOLDER_WIP tag. Removing minor UNTESTED tags (only the throw are not actually exercised, investing time there has a high cost but very little benefit).

* Splitting out smart_holder_type_casters again, into new detail/smart_holder_type_casters_inline_include.h.

* Splitting out smart_holder_init_inline_include.h.

* Adding additional new include files to CMakeLists.txt, tests/extra_python_package/test_files.py.

* clang-format cleanup of most smart_holder code.

* Adding source code comments in response to review.

* Simple micro-benchmark ("ubench") comparing runtime performance for several holders.

Tested using github.com/rwgk/pybind11_scons and Google-internal build system.
Sorry, no cmake support at the moment.

First results: https://docs.google.com/spreadsheets/d/1InapCYws2Gt-stmFf_Bwl33eOMo3aLE_gc9adveY7RU/edit#gid=0

* Breaking out number_bucket.h, adding hook for also collecting performance data for PyCLIF.

* Accounting for ubench in MANIFEST.in (simply prune, for now).

* Smarter determination of call_repetitions.

[skip ci]

* Also scaling performance data to PyCLIF.

[skip ci]

* Adding ubench/python/number_bucket.clif here for general visibility.

* Fix after rebase

* Merging detail/smart_holder_init_inline_include.h into detail/init.h.

* Renaming detail/is_smart_holder_type_caster.h -> detail/smart_holder_sfinae_hooks_only.h.

* Renaming is_smart_holder_type_caster -> type_uses_smart_holder_type_caster for clarity.

* Renaming type_caster_type_is_smart_holder_type_caster -> wrapped_type_uses_smart_holder_type_caster for clarity.

* Renaming is_smart_holder_type_caster_base_tag -> smart_holder_type_caster_base_tag for simplicity.

* Adding copyright notices and minor colateral cleanup.

* iwyu cleanup (comprehensive only for cast.h and smart_holder*.h files).

* Fixing `git rebase master` accident.

* Moving large `pragma warning` block from pybind11.h to detail/common.h.

* Fixing another `git rebase master` accident.
2021-02-23 21:50:42 -08:00
Bertrand MICHEL
74a767d429
Dtype kind vs char (#2864)
* [dtype]: add type() method to access type attribute of PyArray_Descr (eq. to dtype.char in Python)

* [dtype] change type() name method to char_() to be compliant with Python numpy interface

* [dtype] fix by pre-commit

* [dtype] Change comments and solutions format for test

* Clarify documentation and move note about dtype.char vs PyArray_Descr::type to a plain, non-doxygen comment

* Fix and extend tests

* Fix the supposedly fixed tests

* Fix the fixed tests again

Co-authored-by: Bertrand MICHEL <bertrand.michel@onera.fr>
Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-02-23 10:57:28 +01:00
Dustin Spicuzza
c0fbb02c9f
Extract gil management functions to separate header (#2845) 2021-02-22 19:15:40 -08:00
Ralf W. Grosse-Kunstleve
0c42250a4e
Splitting out detail/type_caster_base.h from cast.h, with iwyu cleanup. (#2841)
* Splitting out detail/type_caster_base.h from cast.h.
* Include cleanup guided by include-what-you-use 0.12 based on clang version 9.0.1-11.
2021-02-22 18:38:18 -08:00
jakobjw
98f9a33c62
Correct typo in FAQ (#2868) 2021-02-20 23:28:27 +01:00
dependabot[bot]
59f8d7f1bf
chore(deps): bump jwlawson/actions-setup-cmake from v1.7 to v1.8 (#2865) 2021-02-17 18:48:37 +00:00
Vikram Pal
417067eeb8
Add pybind11::bytearray (#2799)
* Add initial implementation

* Add few more methods

* Add tests

* Fix a typo

* Use std::string constructor which takes size

* Fix implicit sign conversion error

* Add size method and test

* Remove implicit conversion

* Fix bytearray constructors and operator std::string()

* Make implicit bytearray constructor explicit

* Rerun tests

* Add null check

* Rerun tests

* Rerun tests - 2

* Remove NULL check
2021-02-14 15:51:13 +01:00
OnlineCop
cbae6d55c2
docs: fix CMake status for DOWNLOAD_EIGEN (#2857)
Co-authored-by: OnlineCop <onlinecop@gmail.com>
2021-02-12 17:11:23 -05:00
dependabot[bot]
c236239356
chore(deps): bump pypa/gh-action-pypi-publish from v1.4.1 to v1.4.2 (#2851)
Bumps [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) from v1.4.1 to v1.4.2.
- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)
- [Commits](https://github.com/pypa/gh-action-pypi-publish/compare/v1.4.1...27b31702a0e7fc50959f5ad993c78deac1bdfc29)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-02-09 17:00:16 -05:00
Axel Huebl
c78dfb69f2
MSVC but not Clang: /MP (#2824)
On Windows, clang-cl does not understand /MP.
```
clang-cl: warning: argument unused during compilation: '/MP' [-Wunused-command-line-argument]
```
with Clang 10.0.0
2021-02-08 15:40:04 -05:00
Karthik Nishanth
e791ec4e27
fix: add null pointer check with std::localtime (#2846) 2021-02-08 15:38:22 -05:00
Kumar Aditya
948d09d6df
test: Test against Python 3.10 (#2848) 2021-02-08 15:35:30 -05:00
Yannick Jadoul
fe845878d1
Make sure all warnings in pytest get turned into errors (#2838)
* Make sure all warnings in pytest get turned into errors

* Suppress DeprecationWarnings in test_int_convert and test_numpy_int_convert

* PyLong_AsLong only shouts "Deprecated!" on Python>=3.8

* Fix remaining warnings on PyPy and CPython 3.10-dev
2021-02-01 14:52:20 +01:00
Henry Schreiner
721834b422
chore: get PyPy 3.7 wheels using NumPy 1.20 (#2837)
* chore: get PyPy 3.7 wheels using NumPy 1.20

* Add Valgrind suppressions after NumPy update

Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-01-31 17:29:09 -05:00
Yannick Jadoul
6cf6bf203e
Fix confusing weakref constructor overload (#2832)
* Demonstrate issue with weakref constructor overloads

* Fix weakref constructor to convert on being passed a non-weakref object

* Improve on nonlocal-scoped variable in test_weakref

* Keep backwards-compatibility by introducing PYBIND11_OBJECT_CVT_DEFAULT macro

* Simplify test_weakref
2021-01-31 23:13:31 +01:00
Ralf W. Grosse-Kunstleve
932769b038
Adding holder_caster typename SFINAE = void hooks to help work around the current lack of smart-pointer interoperability (#2833)
* Adding move_only_holder_caster `typename SFINAE = void` to enable external specializations.

* Adding SFINAE hook also to copyable_holder_caster, for uniformity, with comment to explain the purpose.
2021-01-30 12:02:24 -08:00
Edward Lockhart
23c3edcf21
When determining if a shared_ptr already exists, use a test on the we… (#2819)
* When determining if a shared_ptr already exists, use a test on the weak_ptr instead of a try/catch block.

* When determining if a shared_ptr already exists, use a test on the weak_ptr instead of a try/catch block.

* weak_from_this is only available in C++17 and later

* Switch to use feature flag instead of C++ version flag.

* Add Microsoft-specific check.

* Avoid undefined preprocessor macro warning treated as error.

* Simplify shared_from_this in init_holder

* Include <version> in detail/common.h (~stolen~ borrowed from @bstaletic's #2816)

* Move class_::get_shared_from_this to detail::try_get_shared_from_this

* Simplify try_get_shared_from_this by using weak_ptr::lock()

Co-authored-by: Yannick Jadoul <yannick.jadoul@belgacom.net>
2021-01-30 20:05:13 +01:00
Ralf W. Grosse-Kunstleve
0432ae7c52
Changing pybind11::str to exclusively hold PyUnicodeObject (#2409)
* Changing pybind11::str to exclusively hold PyUnicodeObject
2021-01-29 09:41:42 -08:00
Yannick Jadoul
587d5f840a
Update breathe to 4.26.1, add make_tuple, make_iterator, and make_key_iterator (#2828) 2021-01-28 12:28:16 +01:00
Ralf W. Grosse-Kunstleve
9b7bfef833
Factoring out find_registered_python_instance() from type_caster_generic::cast. (#2822)
Factoring out find_registered_python_instance() from type_caster_generic::cast.
2021-01-26 21:08:46 -08:00
Henry Fredrick Schreiner
87954e7a54 fix: corrected dev versioning 2021-01-26 22:42:14 -05:00
Henry Fredrick Schreiner
4a5b81b1b7 chore: get back to work 2021-01-26 22:28:09 -05:00
Henry Schreiner
8de7772cc7
chore: prepare for the 2.6.2 release (#2821) 2021-01-26 21:26:45 -05:00
Henry Fredrick Schreiner
732bf88d19 fix: avoid changing class outside of GIL 2021-01-26 20:59:27 -05:00
Henry Fredrick Schreiner
dff9b3b432 chore: add pytest-timeout, mypy 2021-01-26 20:59:27 -05:00
Henry Schreiner
8e5d3d234e
docs: prepare for 2.6.2 (#2820)
* docs: prepare for 2.6.2

* chore: pre-commit autoupdate
2021-01-25 16:09:36 -05:00
dependabot[bot]
42e7380705
chore(deps): bump jwlawson/actions-setup-cmake from v1.6 to v1.7 (#2818)
Bumps [jwlawson/actions-setup-cmake](https://github.com/jwlawson/actions-setup-cmake) from v1.6 to v1.7.
- [Release notes](https://github.com/jwlawson/actions-setup-cmake/releases)
- [Commits](https://github.com/jwlawson/actions-setup-cmake/compare/v1.6...821902fd0e0da89b13fd3161d358e96bf7550883)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-01-25 15:11:18 -05:00
Yannick Jadoul
0bb8ca2639
Always call PyNumber_Index when casting from Python to a C++ integral type, also pre-3.8 (#2801)
* Always call PyNumber_Index when casting from Python to a C++ integral type, also pre-3.8

* Fixed on PyPy

* Simplify use of PyNumber_Index, following @rwgk's idea, and ignore warnings in >=3.8

* Reproduce mismatch between pre-3.8 and post-3.8 behavior on __index__ throwing TypeError

* Fix tests on 3.6 <= Python < 3.8

* No, I don't have an uninitialized variable

* Fix use of __index__ on Python 2

* Make types in test_int_convert more ~boring~ descriptive
2021-01-25 21:05:17 +01:00
crimsoncor
9ea39dc356
Force the builtin module key to be the correct type. (#2814)
* Force the builtin module key to be the correct type.

Previously it was always going to be a std::string which converted into
unicode. Python 2 appears to want module keys to be normal str types, so
this was breaking code that expected plain string types in the
builtins.keys() data structure

* Add a simple unit test to ensure all built-in keys are str

* Update the unit test so it will also run on pypy

* Run pre-commit.

Co-authored-by: Jesse Clemens <jesse.clemens@sony.com>
2021-01-24 09:17:28 -08:00
Henry Schreiner
08bca374fd
docs: update changelog, nicer output for script (#2811) 2021-01-21 11:34:39 -05:00
Henry Schreiner
44105ca1f2 docs: mention that the changelog block in PR is special 2021-01-19 22:47:40 -05:00
Henry Fredrick Schreiner
5b43ac42a0 docs: fix missing line from #2310 2021-01-19 19:56:22 -05:00
Henry Schreiner
2db0264aca
style: add clang-format file (#2310)
* style: adding clang-format as manual hook

* docs: adding a Clang-Format section. (#2803)

Co-authored-by: Ralf W. Grosse-Kunstleve <rwgk@google.com>
2021-01-19 19:10:26 -05:00
Henry Schreiner
130c99544d
fix: support basic dual includes (#2804) 2021-01-19 18:49:03 -05:00
Henry Schreiner
eb83feefff
style: avoid using unintialized variables (#2806)
* style: avoid using unintialized variables

Tested with cmake --warn-unintialized -S . -B build

* refactor: use function for possibly uninit vars
2021-01-19 18:48:22 -05:00
Henry Schreiner
87f5aff4a7
ci: update to setup-cmake v1.6 (#2805) 2021-01-19 18:24:46 -05:00
Antony Lee
e8c4f54316
fix: prepend Pybind11Extension flags rather than appending them. (#2808)
This allows users to set e.g. `extra_compile_args=["-g"]` (temporarily,
for debugging purposes) and not have that get overridden by
Pybind11Extension's default `-g0`.

In order to minimize "order inversion" (not that it really matters,
though) I chose to collect all flags and add them at once (hence the
dropping of `*args`).  I also dropped flag deduplication, which seems
unneeded.
2021-01-19 18:20:30 -05:00
Michael Kuron
48534089f7
fix: Intel ICC C++17 compatibility (#2729)
* CI: Intel icc/icpc via oneAPI

Add testing for Intel icc/icpc via the oneAPI images.
Intel oneAPI is in a late beta stage, currently shipping
oneAPI beta09 with ICC 20.2.

CI: Skip Interpreter Tests for Intel

Cannot find how to add this, neiter the package `libc6-dev` nor
`intel-oneapi-mkl-devel` help when installed to solve this:
```
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - not found
CMake Error at /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:165 (message):
  Could NOT find Threads (missing: Threads_FOUND)
Call Stack (most recent call first):
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:458 (_FPHSA_FAILURE_MESSAGE)
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindThreads.cmake:234 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
  tests/test_embed/CMakeLists.txt:17 (find_package)
```

CI: libc6-dev from GCC for ICC

CI: Run bare metal for oneAPI

CI: Ubuntu 18.04 for oneAPI

CI: Intel +Catch -Eigen

CI: CMake from Apt (ICC tests)

CI: Replace Intel Py with GCC Py

CI: Intel w/o GCC's Eigen

CI: ICC with verbose make

[Debug] Find core dump

tests: use arg{} instead of arg() for Intel

tests: adding a few more missing {}

fix: sync with @tobiasleibner's branch

fix: try ubuntu 20-04

fix: drop exit 1

docs: Apply suggestions from code review

Co-authored-by: Tobias Leibner <tobias.leibner@googlemail.com>

Workaround for ICC enable_if issues

Another workaround for ICC's enable_if issues

fix error in previous commit

Disable one test for the Intel compiler in C++17 mode

Add back one instance of py::arg().noconvert()

Add NOLINT to fix clang-tidy check

Work around for ICC internal error in PYBIND11_EXPAND_SIDE_EFFECTS in C++17 mode

CI: Intel ICC with C++17

docs: pybind11/numpy.h does not require numpy at build time. (#2720)

This is nice enough to be mentioned explicitly in the docs.

docs: Update warning about Python 3.9.0 UB, now that 3.9.1 has been released (#2719)

Adjusting `type_caster<std::reference_wrapper<T>>` to support const/non-const propagation in `cast_op`. (#2705)

* Allow type_caster of std::reference_wrapper<T> to be the same as a native reference.

Before, both std::reference_wrapper<T> and std::reference_wrapper<const T> would
invoke cast_op<type>. This doesn't allow the type_caster<> specialization for T
to distinguish reference_wrapper types from value types.

After, the type_caster<> specialization invokes cast_op<type&>, which allows
reference_wrapper to behave in the same way as a native reference type.

* Add tests/examples for std::reference_wrapper<const T>

* Add tests which use mutable/immutable variants

This test is a chimera; it blends the pybind11 casters with a custom
pytype implementation that supports immutable and mutable calls.

In order to detect the immutable/mutable state, the cast_op needs
to propagate it, even through e.g. std::reference<const T>

Note: This is still a work in progress; some things are crashing,
which likely means that I have a refcounting bug or something else
missing.

* Add/finish tests that distinguish const& from &

Fixes the bugs in my custom python type implementation,
demonstrate test that requires const& and reference_wrapper<const T>
being treated differently from Non-const.

* Add passing a const to non-const method.

* Demonstrate non-const conversion of reference_wrapper in tests.

Apply formatting presubmit check.

* Fix build errors from presubmit checks.

* Try and fix a few more CI errors

* More CI fixes.

* More CI fixups.

* Try and get PyPy to work.

* Additional minor fixups. Getting close to CI green.

* More ci fixes?

* fix clang-tidy warnings from presubmit

* fix more clang-tidy warnings

* minor comment and consistency cleanups

* PyDECREF -> Py_DECREF

* copy/move constructors

* Resolve codereview comments

* more review comment fixes

* review comments: remove spurious &

* Make the test fail even when the static_assert is commented out.

This expands the test_freezable_type_caster a bit by:
1/ adding accessors .is_immutable and .addr to compare identity
from python.
2/ Changing the default cast_op of the type_caster<> specialization
to return a non-const value. In normal codepaths this is a reasonable
default.
3/ adding roundtrip variants to exercise the by reference, by pointer
and by reference_wrapper in all call paths.  In conjunction with 2/, this
demonstrates the failure case of the existing std::reference_wrpper conversion,
which now loses const in a similar way that happens when using the default cast_op_type<>.

* apply presubmit formatting

* Revert inclusion of test_freezable_type_caster

There's some concern that this test is a bit unwieldly because of the use
of the raw <Python.h> functions. Removing for now.

* Add a test that validates const references propagation.

This test verifies that cast_op may be used to correctly detect
const reference types when used with std::reference_wrapper.

* mend

* Review comments based changes.

1. std::add_lvalue_reference<type> -> type&
2. Simplify the test a little more; we're never returning the ConstRefCaster
type so the class_ definition can be removed.

* formatted files again.

* Move const_ref_caster test to builtin_casters

* Review comments: use cast_op and adjust some comments.

* Simplify ConstRefCasted test

I like this version better as it moves the assertion that matters
back into python.

ci: drop pypy2 linux, PGI 20.7, add Python 10 dev (#2724)

* ci: drop pypy2 linux, add Python 10 dev

* ci: fix mistake

* ci: commented-out PGI 20.11, drop 20.7

fix: regression with installed pybind11 overriding local one (#2716)

* fix: regression with installed pybind11 overriding discovered one

Closes #2709

* docs: wording incorrect

style: remove redundant instance->owned = true (#2723)

which was just before set to True in instance->allocate_layout()

fix: also throw in the move-constructor added by the PYBIND11_OBJECT macro, after the argument has been moved-out (if necessary) (#2701)

Make args_are_all_* ICC workarounds unconditional

Disable test_aligned on Intel ICC

Fix test_aligned on Intel ICC

Skip test_python_alreadyset_in_destructor on Intel ICC

Fix test_aligned again

ICC CI: Downgrade pytest

pytest 6 does not capture the `discard_as_unraisable` stderr and
just writes a warning with its content instead.

* refactor: simpler Intel workaround, suggested by @laramiel

* fix: try version with impl to see if it is easier to compile

* docs: update README for ICC

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-17 19:53:07 -05:00
Yannick Jadoul
8449a8089c
fix: only allow integer type_caster to call __int__ method when conversion is allowed; always call __index__ (#2698)
* Only allow integer type_caster to call __int__ or __index__ method when conversion is allowed

* Remove tests for __index__ as this seems to only be used to convert to int in 3.8+

* Take both `int` and `long` types into account for Python 2

* Add test_numpy_int_convert to assert tests currently fail, even though np.intc has an __index__ method

* Also consider __index__ as noconvert to a C++ integer

* New-style classes for Python 2.7; sigh

* Add some tests on types with custom __index__ method

* Ignore some tests in Python <3.8

* Update comment about conversion from np.float32 to C++ int

* Workaround difference between CPython and PyPy's different PyIndex_Check (unnoticed because we currently don't have PyPy >= 3.8)

* Avoid ICC segfault with py::arg()
2021-01-16 20:52:14 -05:00
Henry Schreiner
0df11d857c
docs: update build description slightly (#2794)
* docs: update build description slightly

* docs: missing ticks
2021-01-16 20:12:19 -05:00
Axel Huebl
0b3df7f964
ci: Intel icc/icpc via oneAPI (#2573)
* CI: Intel icc/icpc via oneAPI

Add testing for Intel icc/icpc via the oneAPI images.
Intel oneAPI is in a late beta stage, currently shipping
oneAPI beta09 with ICC 20.2.

* CI: Skip Interpreter Tests for Intel

Cannot find how to add this, neiter the package `libc6-dev` nor
`intel-oneapi-mkl-devel` help when installed to solve this:
```
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - not found
CMake Error at /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:165 (message):
  Could NOT find Threads (missing: Threads_FOUND)
Call Stack (most recent call first):
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindPackageHandleStandardArgs.cmake:458 (_FPHSA_FAILURE_MESSAGE)
  /__t/cmake/3.18.4/x64/cmake-3.18.4-Linux-x86_64/share/cmake-3.18/Modules/FindThreads.cmake:234 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
  tests/test_embed/CMakeLists.txt:17 (find_package)
```

* CI: libc6-dev from GCC for ICC

* CI: Run bare metal for oneAPI

* CI: Ubuntu 18.04 for oneAPI

* CI: Intel +Catch -Eigen

* CI: CMake from Apt (ICC tests)

* CI: Replace Intel Py with GCC Py

* CI: Intel w/o GCC's Eigen

* CI: ICC with verbose make

* [Debug] Find core dump

* tests: use arg{} instead of arg() for Intel

* tests: adding a few more missing {}

* fix: sync with @tobiasleibner's branch

* fix: try ubuntu 20-04

* fix: drop exit 1

* style: clang tidy fix

* style: fix missing NOLINT

* ICC: Update Compiler Name

Changed upstream with the last oneAPI release.

* ICC CI: Downgrade pytest

pytest 6 does not capture the `discard_as_unraisable` stderr and
just writes a warning with its content instead.

* Use new test pinning requirements.txt

* tests: add notes about intel, cleanup

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-15 15:59:47 -05:00
Yannick Jadoul
0f8d5f2eb6
Add a Valgrind build on debug Python 3.9 (#2746)
* Adding a valgrind build on debug Python 3.9

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Add Valgrind suppression files

- Introduce suppression file, populate it with a first suppression taken from CPython, and fix one leak in the tests
- Suppress leak in NumPy
- More clean tests!
- Tests with names a-e passing (except for test_buffer)
- Suppress multiprocessing errors
- Merge multiprocessing suppressions into other suppression files
- Numpy seems to be spelled with a big P
- Append single entry from valgrind-misc.supp to valgrind-python.supp, and make clear valgrind-python.supp is only CPython

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>

* Enable test_virtual_functions with a workaround

* Add a memcheck cmake target

- Add a memcheck cmake target
- Reformat cmake
- Appease the formatting overlords - they are angry
- Format CMake valgrind target decently

* Update CI config to new action versions

* fix: separate memcheck from pytest

* ci: cleanup

* Merge Valgrind and other deadsnakes builds

Co-authored-by: Boris Staletic <boris.staletic@gmail.com>
Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-15 21:07:31 +01:00
heyer2
76a160070b
fix: STATIC and SHARED flags not being detected (#2796)
* Fix STATIC and SHARED flags not being detected

* fix: use classic naming for all lib types

Co-authored-by: Henry Schreiner <henryschreineriii@gmail.com>
2021-01-14 19:51:41 +01:00
Yannick Jadoul
0855146357
Plug leaking function_records in cpp_function initialization in case of exceptions (found by Valgrind in #2746) (#2756)
* Plug leaking function_record objects when exceptions are thrown

* Plug leak of strdup'ed strings in function_record

* Some extra comments about the function_record ownership dance

* Clean up the function_record better, in case of exceptions

* Demonstrate some extra function_record leaks

* Change  DeleteStrings template argument to free_strings runtime argument in destruct(function_record *)

* Zero-state unique_function_record deleter object

* Clarify rvalue reference to unique_ptr parameter in initialize_generic

* Use push_back with const char * instead of emplace_back
2021-01-14 19:34:32 +01:00